Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2129g00003 ATGGGAGCGACCAAGCACGACCAATGGCAGTGGGAGAACGCCACCGCCGGCGCCGCCGCAGGATTCGCCACCGTCGCCGTTGTGCATCCCCTCGACGTTGTCAGAACTAGGTTCCAAGTTAACGATGGTCGAGTCTCTCATCTTCCCAGTTATAAGAACACTGCTCACGCCGTTTTCACCATTGCTCGCTTGGAGGGGTTAAGAGGGTTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATTTCATGGGGTTTATATTTCTTTTTCTATGACAAAGCCAAACAAAGATATGCTAGGAACAGGGAGGAGAAGTTGAACGCAGGTCTTCATCTTGCCTCGGCTGCTGAAGCAGGTGCTTTGGTTTGCTTGTGCACCAATCCTGTTTGGCTAGTAAAAACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGGCCATACGCTGGGCTTTACGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATAGTTCCTGGTCTATTTCTGCAGGTATCTCATGGTGCTATTCAGTTCACAGCATATGAGGAGCTTCGTAAATTTATTGTCGATTTGAAGAGTAAGGGATGTAAAATACACCATCAAAACCCTGATAAATTGTTGAATTCGGTTGATTATGCCGTTCTTGGAGCAACATCAAAAATTGCTGCAATACTTCTAACTTATCCATTTCAGGTTATACGGGCTCGATTGCAGCAACGACCTAGTGGTGATGGGGTTCCGAGATATATGGACAGTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTGTCCGAGGTTTTTACAAGGGAATTACCCCAAACCTTTTGAAAAATGCTCCTGCTTCTTCAATAACTTTTATTGTTTATGAAAATGTTCTAAAATTTCTTAAAGTGGCTCGAAGGAATGACTAA 942 0.4469 MGATKHDQWQWENATAGAAAGFATVAVVHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARLEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREEKLNAGLHLASAAEAGALVCLCTNPVWLVKTRLQLQTPLHQTRPYAGLYDAFRTIMREEGFSALYRGIVPGLFLQVSHGAIQFTAYEELRKFIVDLKSKGCKIHHQNPDKLLNSVDYAVLGATSKIAAILLTYPFQVIRARLQQRPSGDGVPRYMDSWHVVKETARFEGVRGFYKGITPNLLKNAPASSITFIVYENVLKFLKVARRND 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2129g00003 313 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 308 IPR044712 GO:0006862|GO:0055085
Gabi2129g00003 313 FunFam Folate transporter 1, chloroplastic 104 311 - -
Gabi2129g00003 313 Pfam Mitochondrial carrier protein 108 198 IPR018108 -
Gabi2129g00003 313 Pfam Mitochondrial carrier protein 219 307 IPR018108 -
Gabi2129g00003 313 Pfam Mitochondrial carrier protein 9 102 IPR018108 -
Gabi2129g00003 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 305 IPR018108 -
Gabi2129g00003 313 SUPERFAMILY Mitochondrial carrier 11 301 IPR023395 -
Gabi2129g00003 313 Gene3D Mitochondrial carrier domain 98 312 IPR023395 -
Gabi2129g00003 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 196 IPR018108 -
Gabi2129g00003 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
Gabi2129g00003 313 FunFam folate transporter 1, chloroplastic isoform X1 1 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2129g00003 Gabi-Chr2129 3579 19820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2129g00003 28 306 Chloroplast and Mitochondria Gene Families AT2G47490 39.510 1.77e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2129g00003 K15115 - gmx:100809599 554.673