Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2129g00002 ATGGGAGCGACCAAGCACGACCAATGGCAGTGGGAGAACGCCACCGCCGGCGCCGCCGCAGGATTCGCCACCGTCGCCGTTGTGCATCCCCTCGACGTTGTCAGAACTAGGTTCCAAGTTAACGATGGTCGAGTCTCTCATCTTCCCAGTTATAAGAACACTGCTCACGCCGTTTTCACCATTGCTCGCTTGGAGGGGTTAAGAGGGTTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATTTCATGGGGTTTATATTTCTTTTTCTATGACAAAGCCAAACAAAGATATGCTAGGAACAGGGAGGAGAAGTTGAACGCAGGTCTTCATCTTGCCTCGGCTGCTGAAGCAGGTGCTTTGGTTTGCTTGTGCACCAATCCTGTTTGGCTAGTAAAAACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGGCCATACGCTGGGCTTTACGATGCATTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATAGTTCCTGGTCTATTTCTGCAGGTATCTCATGGTGCTATTCAGTTCACAGCATATGAGGAGCTTCGTAAATTTATTGTCGATTTGAAGAGTAAGGGATGTAAAATACACCATCAAAACCCTGATAAATTGTTGAATTCGGTTGATTATGCCGTTCTTGGAGCAACATCAAAAATTGCTGCAATACTTCTAACTTATCCATTTCAGGTTATACGGGCTCGATTGCAGCAACGACCTAGTGGTGATGGGGTTCCGAGATATATGGACAGTTGGCATGTTGTGAAAGAAACTGCACGGTTAATGGAGTTGGGCAAGGCTACTCACGGCCAGAAGATGTTAAAAGTGCCTTTGCCAGCGAAACCACTTGGGAGCGCCCTCCTGGTCCTTCTCAAGGTGCATGGAAACCAAGAGAAAGACAATATGGCGCCATTTGAATGTGCACTCACTTTTTTCTTTTTGCTTTATTTACTGACAGTACGTTAA 996 0.4639 MGATKHDQWQWENATAGAAAGFATVAVVHPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARLEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARNREEKLNAGLHLASAAEAGALVCLCTNPVWLVKTRLQLQTPLHQTRPYAGLYDAFRTIMREEGFSALYRGIVPGLFLQVSHGAIQFTAYEELRKFIVDLKSKGCKIHHQNPDKLLNSVDYAVLGATSKIAAILLTYPFQVIRARLQQRPSGDGVPRYMDSWHVVKETARLMELGKATHGQKMLKVPLPAKPLGSALLVLLKVHGNQEKDNMAPFECALTFFFLLYLLTVR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2129g00002 331 SUPERFAMILY Mitochondrial carrier 11 269 IPR023395 -
Gabi2129g00002 331 Gene3D Mitochondrial carrier domain 101 280 IPR023395 -
Gabi2129g00002 331 FunFam Folate transporter 1, chloroplastic 104 281 - -
Gabi2129g00002 331 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 271 IPR044712 GO:0006862|GO:0055085
Gabi2129g00002 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 107 196 IPR018108 -
Gabi2129g00002 331 Pfam Mitochondrial carrier protein 108 198 IPR018108 -
Gabi2129g00002 331 Pfam Mitochondrial carrier protein 9 102 IPR018108 -
Gabi2129g00002 331 FunFam folate transporter 1, chloroplastic isoform X1 1 103 - -
Gabi2129g00002 331 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 98 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2129g00002 Gabi-Chr2129 3361 19820 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2129g00002 28 249 Chloroplast and Mitochondria Gene Families AT2G47490 40.611 6.16e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2129g00002 K15115 - gmx:100809599 478.404