Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2128g00010 ATGTCAGAGAGAACAGTTAGCACTCATGTGAAAGAGCCTCGTCTTGTAGCTAGGAAATTCTTGGCTAGACCCCAACATGAAGGTGTTGGGGCTGTTGTTAGAAGAAGCATAGGAAGGTTTGAGCTCAAGTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTTACTGCTCCTTCTGGCTTCCCTGATCACCCTCATAGAGGCTTTGAGACGGTCACATACATGTTGCAGGGAGCTATAACGCATGAAGATTTTGAAGGACATAAGGGAACAATAGAAGCTGGTGACTTGCAGTGGATGACTGCAGGGAGAGGAATAGTTCACTCAGAAATGCCTGCAGCTCAAGGAAGCCAAAAGGGTCTTCAGCTGTGGATCAACCTGTCTTCCAAATATAAAATGATTGAACCAAGGTATCAAGAAGTGTTGAGTAAGGACATAGAAGAAGCTGAGGAAGATGGTATCAAGGTTAGAATTATAGCTGGGGAAGCTCTAGGGATAAAGTCTCCAATATACACAAGGACACCAACTATGTACTTGGACTTCTCTCTTAAACCTGGTGCTCACATTCAACAACCTATACCAAAATCTTGGAATGCTTTTGTTTATGTCTTGGAAGGAGAGGGTGTCTTTGGAAACCTGGAATCTCAGCCTGCAAACTCTCACCATATCCTTCTTCTTGGTATTGGGGATGGCTTAGAGGCATGGAACAAATCTTGTAATATCCTTAGGTTCATTTTGGTTGGAGGGGAACCTCTGGGAGAACCTGTGATGCAATTTGGACCCTTTGTGATGAACACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAATTTTGCTAATGGATTTGAGAAAGCAAGACATTGGAGATCTGAAAGTGCAATTAGCCTTGATTTTTGA 906 0.426 MSERTVSTHVKEPRLVARKFLARPQHEGVGAVVRRSIGRFELKYFDPFLVLDEFSVTAPSGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGSQKGLQLWINLSSKYKMIEPRYQEVLSKDIEEAEEDGIKVRIIAGEALGIKSPIYTRTPTMYLDFSLKPGAHIQQPIPKSWNAFVYVLEGEGVFGNLESQPANSHHILLLGIGDGLEAWNKSCNILRFILVGGEPLGEPVMQFGPFVMNTQEEIDQTIDDFENFANGFEKARHWRSESAISLDF 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2128g00010 301 PIRSF Pirin 12 292 IPR012093 -
Gabi2128g00010 301 CDD cupin_pirin_C 176 252 - -
Gabi2128g00010 301 PANTHER PIRIN-RELATED 1 295 IPR012093 -
Gabi2128g00010 301 Pfam Pirin 33 126 IPR003829 -
Gabi2128g00010 301 CDD cupin_pirin_N 31 128 - -
Gabi2128g00010 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Gabi2128g00010 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Gabi2128g00010 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Gabi2128g00010 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Gabi2128g00010 301 FunFam pirin 27 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2128g00010 Gabi-Chr2128 209998 212781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2128g00010 13 289 Calmodulin-binding Proteins AT3G59220 59.140 4.23e-125 357