Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2128g00007 ATGGTAACGGTGCCATTTGATATGATACCTGAGGTGGTGTGGAATGTGGCTCACGACCACCAACAGGTTGTGCCTATATCACTTTTCGTGGCTGTTCTTTGTCTCTGCTTGGTCATTGGTCACTTGCTTGAAGAAAATCGATGGGTTAATGAATCCATTGTTGCCATTCTAGTTGGATGCATTGCTGGACTGGTACTCTTATTAATCACCAAGGGGAAGAGTTCTCACATCCTTACCTTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATTATATTCAATGCTGGATTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTTTTAACCATCATGCTGTATGGGGTGATTGGTGTTTTTATTTCAGCATCTGTTATTACTAGCGGCAGCTGGTGGTTGTTCCCCAAGTTGAACTTCCTTTGTCTGAATGCGCGAGATTACCTTGCTATAGGAGCAATTTTCTCATCAACAGACACAGTTTGTACATTGCAGGTTCTCCATCAAGATGAAACTCCTTTACTGTACAGCCTAGTCTTTGGGGAAGGAGTTGTAAATGATGCAACATCAGTTGTTCTTTTCAATGCAGTGCAAAAGCTTGATGTTTCAAGACTTAGTGGCAGTAATGCACTCCGGGTTATTGGAGATTTCTTGTATCTATTCACAGCAAGCACTGGTCTCGGAGTCATAGCTGGACTTCTCACAGCATATATCTTGAGAGCTTTGAGCATTGGAAAACATTCAAGTGTTCGTGAAATTGCATTGATGATCTTAATGGCATACTTATCCTATACGTTGTCAGAGCTACTCGAACTTAGTGGAATACTCACTGTTTTCTTTTGTGGAATACTAATGTCACATTATGCATGGCATAATGTGACTGAAACTTCAAGAATCACAACCAGGCATGTGTTTGCAACAATGTCATTTATTGCAGAAACCTTCATATTTCTTTATGTGGGCATGGATGCCCTAGACATTGAAAAGTGGAAGATGAACAAACTAAGCTTTGGAAATTTGATGGGAATTTACAGCACCTTAATCTTATTGATATTGCTTGGGCGGGCTGCTTTTGTTTTCCCTCTCTCTGCTTTCGCCAATTATATGAGTAGTCGCTCTGACCAAACATCATGTATCACATTCAAACATCAGATAATCATTTGGTGGGCTGGACTAATGAGGGGAGCAGTCTCCATTGCTCTAGCTTTCAAACAGTTCACATTTTCTGGGGTTGCTTCTGATCCAATTAATGCGACAATGATTACCAACACTATCATTGTTGTCCTTTTTAGCACACTGGTATTTGGTTTTCTCACAAAACCACTTATTAGATATCTGCTTCCTAACAATGCAACAACGAAAAACATCAGCCATGAAGAATCAGGTCCATCAGTTGTGGACTTGAATCTACCTTTGCTATCCCTTGAGGAGTCAGCTGAAACCAACATTAGACGTGCAAAGGAAAGTTTGTCCATGTTAATAGAAAGTCCAGTGTACACTATACATTACTATTGGAGGAGATTTGATGATGCTTACTTGAGACCTATATTTGGGGGACCTCATGGTAACCAGTCACAGTGCTAG 1587 0.4033 MVTVPFDMIPEVVWNVAHDHQQVVPISLFVAVLCLCLVIGHLLEENRWVNESIVAILVGCIAGLVLLLITKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLYGVIGVFISASVITSGSWWLFPKLNFLCLNARDYLAIGAIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRLSGSNALRVIGDFLYLFTASTGLGVIAGLLTAYILRALSIGKHSSVREIALMILMAYLSYTLSELLELSGILTVFFCGILMSHYAWHNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMNKLSFGNLMGIYSTLILLILLGRAAFVFPLSAFANYMSSRSDQTSCITFKHQIIIWWAGLMRGAVSIALAFKQFTFSGVASDPINATMITNTIIVVLFSTLVFGFLTKPLIRYLLPNNATTKNISHEESGPSVVDLNLPLLSLEESAETNIRRAKESLSMLIESPVYTIHYYWRRFDDAYLRPIFGGPHGNQSQC 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2128g00007 528 NCBIfam sodium/hydrogen exchanger 3 21 461 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi2128g00007 528 PANTHER SODIUM/HYDROGEN EXCHANGER 19 523 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Gabi2128g00007 528 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi2128g00007 528 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi2128g00007 528 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi2128g00007 528 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Gabi2128g00007 528 Gene3D - 145 197 - -
Gabi2128g00007 528 Pfam Sodium/hydrogen exchanger family 30 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2128g00007 Gabi-Chr2128 136670 152613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2128g00007 15 528 Antiporters AT5G55470 70.270 0.0 760
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2128g00007 - - gmx:100813332 886.33