Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2106g00026 ATGTCACCGGTAAGTGACGTCGCGTCATCGTCTCCGGCGTCTTTCAGGCTCCGTTGGGACGTGTTCCTGAGCTTCAGAGGCACCGACACGCGCGAGACTTTCACGAAGCACCTCTACGACGCGCTCCATGGTAACGGGGTTCGGGTGTTCCGTGATGATGACGGGTTGGATCGTGGTGACGAGATCAAGGAGAGTCTTTTGGAGGCCATTGAAGACTCTGCAGCCTCTGTTATAATTCTATCTCCTGATTATGCATCGTCCCATTGGTGCCTCGAGGAGTTAGCGAAGATTTGCGACTGTGGGAGGCTGATCTTGCCCGTTTTCTATCGGGTCGACCCGTCGGATGTCCGAAAACAAAAGGGTCCCTTTGAAGAGGCTTTCAGGTCCCACATAGACAGGTTTCAGGAAAAGAAGGTTCAGTCGTGGAGGGATGCCATGACCAAAGTGGGTGGAATCGCTGGTTGGGTTTCTAATCACAACAGTGACAGTGATAAGCTCATTCGAGTTTTGGTGAAAACGGTTTTGAAGCAGATGAGGAATACTCCACTGACTGTGGCTCAATATACAGTTGGGCTTGATGATAGAGTTGAAGAGTTGAGAAAGTTACTTGATGTGAAATCCAATGATGTAAGAGTTTTGGGGTTGTATGGGATGGGTGGGGTTGGTAAGACAACATTGGCAAAGAGCCTCTTCAACAGCCTTGTTGTTCATTTTGAGCGTCGTAGCTTCATTTCAAATGTTAGAGAAGTTTCAAAACATGATGATGGTTTGATTTCTCTTCAAAACAGAATTCTTGGTGATCTTTCCCCTGGTGGAACAGTGATTAATCTTGTCAATGATGGTATTTCTGCTATCAAAAGAATAGTAGAGGAAAATCGAGTTCTGTTAATCCTAGATGATGTTGATAATGTAAAGCAGCTTGATTTTTTGATTGGTAAGAGGGAATGGTTTTATAAAGGAAGCCGTGTAGTAATAACCACAAGGGATCAAGGAGTTTTACATGAGAGTTATGTTAATGTGAAATATGAGGTGCAAGTATTGGAATCCCCTGAAGCACTAGAATTATTCTGTTACCATGCAATGAGAAGAAAGGAACTTGCTGGTGAATTTTTGGATGTGTCAAATGAAATTGTGAGTCACACAGGAAAATTGCCTTTGGCTTTGGAAGTTTTTGGGTCTTTTCTATTTGATAAGAGGACGATTAAGGAATGGAAAGATGCTTTGGAGAAGCTGAAACAACAGATTCGTCCTTCATGTCTTCAGGATGTGTTGAAGATAAGTTTTGATGCTTTAGATGAACAAGAGAAGATTATATTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGAAATGAATAGGGATGATGTGATTGATATATTGAATGGTTGTGGTTTTAGAGGAGAGATAGCTATAACAGTTCTCACTGCAAAATGTTTGATTAAAATCACTAAGGATAGTATCGTGTGGATGCATGATCAACTTAGAGACATGGGAAGGCAAATTGTTCAAAATGAAAACCTTTTAGATTGTGGTCTACGTAGCAGGCTCTGGGATCGTGATGAAATCTTTACTGTCTTGAAGACTAACAAGGGAACAAGAAGTGTTCAAGGGATTGTCCTAGACTCATGTATAAAAGAGAAGTATAAAAAGTATGTGCGGGATAGAGAAGAGAAAGCAAAACAGGTTACACTTAAGACAAAGCACTTTCAACCAATGGTTTCCTTAAGATTGCTTCAAATTAATTATTCGAGATTGGAAGGACAATTTAGATGTCTCCCTCCAGGACTGAAGTGGTTACAATGGAAACAATGTCCATTAAGGTATATGCCTTCTAGCTATAATCCTTTGGAACTTGCAGTGATTGATCTCTCGGAAAGTAAGATTGAAACGCTGTGGGGCAGGCACAATAACAAGGTGGCTAAGCACTTGATGGTTTTAAACCTCTCCAGTTGCCACAATTTGGCAGCAATTCCTGATTTAAGTGGGTATCTATCTCTGAACAAGATTGTTTTGGAGGCATGCACTCTTTTAACTGGGATTCATGAATCACTTGGAAATCTAAGTACCTTAGTTCACTTGAACTTGCGCCTCTGCTATAACCTTATAGAATTACCTGGTGATATCTCTGGGCTGAAAAATCTTGAGGACCTTATTCTTTGTGGCTGCTGGAAATTGAAAGCATTACCAAAAGACATAAGCTGCATGGTCTCTTTAAGACAACTTCTTCTTGATGACACTGCTATAACTGAGTTACCTGAGTCCATCTTCCACCTCACAAAACTTGAAAAGTTAAGTGCAAATAAATGCCAGTTTTTGAAGAGGTTACCTAGTTGCATTGGGAAACTGTGCTCCCTGCAAGAATTGTCACTCAACCATACAGCATTGGAGGAATTGCCTGATTCTGTTGGTTCATTGGAAAACCTTGAGATGCTTGGTTTGGTGGGGTGTAAGTCCCTCTCTGTGATTCCTAACTCTGTTGGGGAACTAATTTCATTGACACAATTATTTTTTGGCGTCAGTGGAATTAAAGAATTACCTTCTTCTATTGGTTCTTTATCATATTTAAGGAAACTGTCTCTCGGAGGCTGCACTTTTATTGACAAATTGCCTGTGTCAATAGAAGCCTTAGTTTCTATTGTTGACCTTCAGTTAGATGGGACATCAATTACCGATTTGCCAGATCAAATTGGAGGCATGAAAATGCTACAAAAGCTTGAGATGAGAAATTGTCAACATCTCAAGATTCTACCAACATCAATTGGCTATTTGTCAGCTCTTACCACATTGGACATGTATAAGACTAACATTACTGAATTGCCAGAATCAATAGGAAAGTTGGAAAACCTTATTCGGTTGAGATTAGATATGTGCAAACAGCTCCAAAGGCTTCCAGCCTCCATTGGGAATTTGAAATCTTTGCAATGGTTACAGATGAAGGAAACAGCAGTTATACATCTGCCTGATAGCTTAGGGATGCTTTCAAGCCTGGTAAAACTGGACATGGAAAGAAGACCTTATCTTAATATGGTTGCAAACAACATGCCTACAGGGATCATAATTCCTAACAAACAAGAAGAACCTAATTCAGAGGCAATCTTAACTTCTTTTTGCAATCTAACCTTGATGGAAGAGCTAAATGCTCATGGATGGAGAATATTTGGAAAAATTCCAGATGAATTTGAAAAGCTATCATCACTAGAAACTTTAAGTTTAGGCCACAACAACATTTGCAGTCTTCCAACCAGCATGACAGGCCTCTCCTGTCTCAAAAAACTTTTGTTGTCAGATTGCAGGGAGCTCATGTTTTTGCCTCCTCTTCCCTCTAGCTTAGAAGAGCTTAATATTGCAAACTGTACTGCAGTACAGTACATATCTGATATTTCAAACTTGGAGAACTTAGAGGAGTTGAACCTTACAAATTGTGAAAAGGTGGTGGATATACCAGGTCTTGAACATTTGAAGTCCTTAAGAAGGTTGTACATGAGTGGATGCATTGGATGCTCCCTTGCCGTAAAGAGAAGATTTTCCAAGGTTCTACTTAAAAAATTACAGATTTTGATTATGCCTGGAAGCAGAGTTCCAGATTGGTTTTCTGGGGAATCAGTGGTCTTTTCCAAGCGAAGAAACCGCGAACTTAAAGGTATTGTTTGTGTTGGGGTGCTCTCTTTCAACCATATACCTGAAAACCAAAGAGATGAACTGCAGATAGTGGATGTTCAAGGAAAAATCTTCAATTTGACTGATAATGTATATAGCACAACGTTTCGCCTGCTAGGAGTACCTAGGACAAATGAAGACCATATTTTTGTGCGTAGATTTGGAGCTCATACTCCGTTGGTTTTTCAGTTAAAAGATAGATATACCTTACATTTGACAAAGCGAAACCCACCCTATGTTGAGGGGCTGGAGCTGAAGAACTGTGGAATTTATTTAGTCTTTGAAGGTGATGATGATTATGAGGGAGATGAAGGATCACTAGACGAATGTCAATACTCAGTTTCACAAAAATTAGCCAAGTTCTTCAACTCTATTGCAGAGCATGACCTATTTGTGTGA 4056 0.4024 MSPVSDVASSSPASFRLRWDVFLSFRGTDTRETFTKHLYDALHGNGVRVFRDDDGLDRGDEIKESLLEAIEDSAASVIILSPDYASSHWCLEELAKICDCGRLILPVFYRVDPSDVRKQKGPFEEAFRSHIDRFQEKKVQSWRDAMTKVGGIAGWVSNHNSDSDKLIRVLVKTVLKQMRNTPLTVAQYTVGLDDRVEELRKLLDVKSNDVRVLGLYGMGGVGKTTLAKSLFNSLVVHFERRSFISNVREVSKHDDGLISLQNRILGDLSPGGTVINLVNDGISAIKRIVEENRVLLILDDVDNVKQLDFLIGKREWFYKGSRVVITTRDQGVLHESYVNVKYEVQVLESPEALELFCYHAMRRKELAGEFLDVSNEIVSHTGKLPLALEVFGSFLFDKRTIKEWKDALEKLKQQIRPSCLQDVLKISFDALDEQEKIIFLDIACLFVQMEMNRDDVIDILNGCGFRGEIAITVLTAKCLIKITKDSIVWMHDQLRDMGRQIVQNENLLDCGLRSRLWDRDEIFTVLKTNKGTRSVQGIVLDSCIKEKYKKYVRDREEKAKQVTLKTKHFQPMVSLRLLQINYSRLEGQFRCLPPGLKWLQWKQCPLRYMPSSYNPLELAVIDLSESKIETLWGRHNNKVAKHLMVLNLSSCHNLAAIPDLSGYLSLNKIVLEACTLLTGIHESLGNLSTLVHLNLRLCYNLIELPGDISGLKNLEDLILCGCWKLKALPKDISCMVSLRQLLLDDTAITELPESIFHLTKLEKLSANKCQFLKRLPSCIGKLCSLQELSLNHTALEELPDSVGSLENLEMLGLVGCKSLSVIPNSVGELISLTQLFFGVSGIKELPSSIGSLSYLRKLSLGGCTFIDKLPVSIEALVSIVDLQLDGTSITDLPDQIGGMKMLQKLEMRNCQHLKILPTSIGYLSALTTLDMYKTNITELPESIGKLENLIRLRLDMCKQLQRLPASIGNLKSLQWLQMKETAVIHLPDSLGMLSSLVKLDMERRPYLNMVANNMPTGIIIPNKQEEPNSEAILTSFCNLTLMEELNAHGWRIFGKIPDEFEKLSSLETLSLGHNNICSLPTSMTGLSCLKKLLLSDCRELMFLPPLPSSLEELNIANCTAVQYISDISNLENLEELNLTNCEKVVDIPGLEHLKSLRRLYMSGCIGCSLAVKRRFSKVLLKKLQILIMPGSRVPDWFSGESVVFSKRRNRELKGIVCVGVLSFNHIPENQRDELQIVDVQGKIFNLTDNVYSTTFRLLGVPRTNEDHIFVRRFGAHTPLVFQLKDRYTLHLTKRNPPYVEGLELKNCGIYLVFEGDDDYEGDEGSLDECQYSVSQKLAKFFNSIAEHDLFV 1351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2106g00026 1351 Gene3D - 346 432 IPR042197 -
Gabi2106g00026 1351 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Gabi2106g00026 1351 Pfam NB-ARC domain 194 416 IPR002182 GO:0043531
Gabi2106g00026 1351 Pfam TIR domain 19 180 IPR000157 GO:0007165
Gabi2106g00026 1351 SMART LRR_typ_2 923 946 IPR003591 -
Gabi2106g00026 1351 SMART LRR_typ_2 876 899 IPR003591 -
Gabi2106g00026 1351 SMART LRR_typ_2 782 805 IPR003591 -
Gabi2106g00026 1351 SMART LRR_typ_2 1063 1086 IPR003591 -
Gabi2106g00026 1351 SMART LRR_typ_2 735 758 IPR003591 -
Gabi2106g00026 1351 SMART LRR_typ_2 829 852 IPR003591 -
Gabi2106g00026 1351 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 155 IPR035897 -
Gabi2106g00026 1351 SUPERFAMILY L domain-like 489 893 - -
Gabi2106g00026 1351 SMART till_3 18 152 IPR000157 GO:0007165
Gabi2106g00026 1351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 442 IPR027417 -
Gabi2106g00026 1351 Gene3D - 176 342 IPR027417 -
Gabi2106g00026 1351 ProSiteProfiles Leucine-rich repeat profile. 1065 1086 IPR001611 GO:0005515
Gabi2106g00026 1351 Gene3D Ribonuclease Inhibitor 914 1009 IPR032675 -
Gabi2106g00026 1351 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 180 - -
Gabi2106g00026 1351 Gene3D Ribonuclease Inhibitor 727 913 IPR032675 -
Gabi2106g00026 1351 ProSiteProfiles Leucine-rich repeat profile. 1132 1154 IPR001611 GO:0005515
Gabi2106g00026 1351 Gene3D - 16 175 IPR035897 -
Gabi2106g00026 1351 Gene3D Ribonuclease Inhibitor 1010 1215 IPR032675 -
Gabi2106g00026 1351 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 777 IPR044974 GO:0006952
Gabi2106g00026 1351 PRINTS Disease resistance protein signature 212 227 - -
Gabi2106g00026 1351 PRINTS Disease resistance protein signature 381 395 - -
Gabi2106g00026 1351 PRINTS Disease resistance protein signature 803 819 - -
Gabi2106g00026 1351 PRINTS Disease resistance protein signature 288 302 - -
Gabi2106g00026 1351 SUPERFAMILY L domain-like 869 1191 - -
Gabi2106g00026 1351 Gene3D Ribonuclease Inhibitor 555 726 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2106g00026 Gabi-Chr2106 274413 281563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2106g00026 785 999 WRKY Transcription Factor Family AT4G12020 30.876 5.26e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2106g00026 - - gmx:100784137 2038.46