Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2106g00023 ATGCCGTCTAACGCGGATCTGGACCGGCAGATCGAGCATCTGATGGAGTGCAAGCCTCTGCCGGAGGCGGAGGTAAAGGCGCTGTGCGATCAGGCGAGGACGATTCTGGTGGAGGAGTGGAACGTTCAGCCGGTGAAGTGCCCCGTGACGGTGTGTGGTGACATTCACGGTCAGTTCTACGATCTCATCGAGCTGTTTCGGATAGGAGGAAATGCGCCTGATACTAATTACCTCTTTATGGGCGATTATGTAGATCGTGGGTATTATTCAGTGGAGACCGTTACCCTTTTGGTTGCCTTAAAAGTCCGATATAGAGATAGAATTACAATTCTCAGGGGAAATCATGAGAGCCGTCAAATTACTCAAGTGTATGGCTTCTATGATGAATGCTTGAGAAAATATGGAAATGCAAATGTCTGGAAATTCTTTACTGACTTGTTTGATTACTTACCTCTGACTGCCCTCATTGAGAGTCAGATTTTCTGTTTGCATGGAGGTCTGTCACCGTCTTTGGATACACTGGATAATATTCGGGCCTTGGATCGCATACAGGAGGTTCCGCACGAAGGACCAATGTGTGATCTGTTGTGGTCTGATCCAGATGATCGCTGTGGTTGGGGGATATCTCCACGTGGTGCTGGATATACATTTGGACAGGATATAGCTGCTCAGTTTAATCATACCAATGGTCTCTCCCTGATATCTAGAGCTCACCAGCTTGTTATGGAAGGTTACAATTGGTGCCAGGTAGACAAGAATGTGGTCACTGTTTTTAGTGCTCCAAATTACTGCTATCGATGTGGGAATATGGCTGCTATACTAGAAATTGGAGAGAATATGGATCAAAATTTTCTGCAGTTTGATCCAGCCCCCAGGCAAATCGAACCTGACACCACACGAAAGACTCCAGATTATTTTTTGTAA 924 0.46 MPSNADLDRQIEHLMECKPLPEAEVKALCDQARTILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQVDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2106g00023 307 Gene3D - 2 307 IPR029052 -
Gabi2106g00023 307 Pfam Calcineurin-like phosphoesterase 48 239 IPR004843 GO:0016787
Gabi2106g00023 307 SMART pp2a_7 20 291 IPR006186 GO:0016787
Gabi2106g00023 307 CDD MPP_PP2A_PP4_PP6 6 291 - -
Gabi2106g00023 307 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Gabi2106g00023 307 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Gabi2106g00023 307 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Gabi2106g00023 307 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Gabi2106g00023 307 PRINTS Serine/threonine phosphatase family signature 253 269 IPR006186 GO:0016787
Gabi2106g00023 307 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Gabi2106g00023 307 PRINTS Serine/threonine phosphatase family signature 230 250 IPR006186 GO:0016787
Gabi2106g00023 307 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 307 IPR047129 GO:0004722
Gabi2106g00023 307 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
Gabi2106g00023 307 FunFam Serine/threonine-protein phosphatase 1 307 - -
Gabi2106g00023 307 SUPERFAMILY Metallo-dependent phosphatases 6 294 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2106g00023 Gabi-Chr2106 233719 238244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2106g00023 49 225 Calmodulin-binding Proteins AT5G63870 36.449 2.38e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2106g00023 K04382 - gmx:100794029 638.262