Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2106g00022 ATGCCGTCTAACGCGGATCTGGACCGGCAGATCGAGCATCTGATGGAGTGCAAGCCTCTGCCGGAGGCGGAGCTGTTTCGGATAGGAGGAAATGCGCCTGATACTAATTACCTCTTTATGGGCGATTATGTAGATCGTGGGTATTATTCAGTGGAGACCGTTACCCTTTTGGTTGCCTTAAAAGTCCGATATAGAGATAGAATTACAATTCTCAGGGGAAATCATGAGAGCCGTCAAATTACTCAAGTGTATGGCTTCTATGATGAATGCTTGAGAAAATATGGAAATGCAAATGTCTGGAAATTCTTTACTGACTTGTTTGATTACTTACCTCTGACTGCCCTCATTGAGAGTCAGATTTTCTGTTTGCATGGAGGTCTGTCACCGTCTTTGGATACACTGGATAATATTCGGGCCTTGGATCGCATACAGGAGGTTCCGCACGAAGGACCAATGTGTGATCTGTTGTGGTCTGATCCAGATGATCGCTGTGGTTGGGGGATATCTCCACGTGGTGCTGGATATACATTTGGACAGGATATAGCTGCTCAGTTTAATCATACCAATGGTCTCTCCCTGATATCTAGAGCTCACCAGCTTGTTATGGAAGGTTACAATTGGTGCCAGGACAAGAATGTGGTCACTGTTTTTAGTGCTCCAAATTACTGCTATCGATGTGGGAATATGGCTGCTATACTAGAAATTGGAGAGAATATGGATCAAAATTTTCTGCAGTTTGATCCAGCCCCCAGGCAAATCGAACCTGACACCACACGAAAGACTCCAGATTATTTTTTGTAA 801 0.4432 MPSNADLDRQIEHLMECKPLPEAELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKFFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQLVMEGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2106g00022 266 ProSitePatterns Serine/threonine specific protein phosphatases signature. 71 76 IPR006186 GO:0016787
Gabi2106g00022 266 SUPERFAMILY Metallo-dependent phosphatases 6 253 IPR029052 -
Gabi2106g00022 266 PRINTS Serine/threonine phosphatase family signature 70 94 IPR006186 GO:0016787
Gabi2106g00022 266 PRINTS Serine/threonine phosphatase family signature 105 131 IPR006186 GO:0016787
Gabi2106g00022 266 PRINTS Serine/threonine phosphatase family signature 134 161 IPR006186 GO:0016787
Gabi2106g00022 266 PRINTS Serine/threonine phosphatase family signature 212 228 IPR006186 GO:0016787
Gabi2106g00022 266 PRINTS Serine/threonine phosphatase family signature 37 64 IPR006186 GO:0016787
Gabi2106g00022 266 PRINTS Serine/threonine phosphatase family signature 190 210 IPR006186 GO:0016787
Gabi2106g00022 266 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 24 266 IPR047129 GO:0004722
Gabi2106g00022 266 Gene3D - 6 266 IPR029052 -
Gabi2106g00022 266 SMART pp2a_7 7 250 IPR006186 GO:0016787
Gabi2106g00022 266 CDD MPP_PP2A_PP4_PP6 6 250 - -
Gabi2106g00022 266 Pfam Calcineurin-like phosphoesterase 33 199 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2106g00022 Gabi-Chr2106 233719 238244 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2106g00022 37 185 Calmodulin-binding Proteins AT5G63870 35.676 2.11e-23 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2106g00022 K04382 - gmx:100784312 540.421