Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2106g00002 ATGGAGACGGATGGTGTCGTTTCTTTTAATATCTCACCGGAAGATTCCGAAGAGGTTCATGTTTTGGCTGTCGATGACAGCCTTGTTGATCGAAAGGTCATTGAACGCTTGCTCAAAATATCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCCCTGCAATTCCTGGGGCTAGACGAGCAGAGAAGGAACTCTGAATCTGATGGTTTTATTAGTTTAAAGGTGGATCTAATAATCACCGATTACTGCATGCCCGGAATGACTGGTTACGAGTTGCTCAAGAAAATCAAGGAATCATCCACTTTCAGAGAAATTCCTGTAGTGATTATGTCTTCTGAAAACATTTTGCCCCGCATAGACAGATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAGTTATCTGATGTGAAAAGATTGAAGGATTATATGACGACGAGAGAGGTCAGAGGAGGTAACGGTGGTGTGGAGATCAATAATAAAAGGAAGCTGCAAGAAACCTCTGACCTGTCATCATCACCACCGTCCGTTTTCTCATCAACACTTTCACCATCACCATCACCATCTCCTTCGTCTTCACCCGGCGTGCCTGATTCTCCAATCAGACGGCTTAAATTGACCACCGTCGATTAA 648 0.4414 METDGVVSFNISPEDSEEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRNSESDGFISLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENILPRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTTREVRGGNGGVEINNKRKLQETSDLSSSPPSVFSSTLSPSPSPSPSSSPGVPDSPIRRLKLTTVD 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2106g00002 215 SMART REC_2 19 149 IPR001789 GO:0000160
Gabi2106g00002 215 SUPERFAMILY CheY-like 19 145 IPR011006 -
Gabi2106g00002 215 CDD REC_typeA_ARR 21 145 - -
Gabi2106g00002 215 ProSiteProfiles Response regulatory domain profile. 20 150 IPR001789 GO:0000160
Gabi2106g00002 215 Gene3D - 19 181 - -
Gabi2106g00002 215 MobiDBLite consensus disorder prediction 170 191 - -
Gabi2106g00002 215 Pfam Response regulator receiver domain 21 142 IPR001789 GO:0000160
Gabi2106g00002 215 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 165 IPR045279 GO:0009736
Gabi2106g00002 215 MobiDBLite consensus disorder prediction 154 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2106g00002 Gabi-Chr2106 41137 42438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2106g00002 1 171 Response Regulator Gene Family AT1G10470 68.421 6.23e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2106g00002 Response_reg 3.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2106g00002 K14492 - gmx:100779833 295.049