Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2104g00034 ATGAAGCCCACGGCAACATTCCTCTCGTTCCTAACCCCAACGCTCCTTGGTCTTCTTGGAGCAACATTCCAAAGCACCCTCTCTTGTTACTCTTGTTCACTCTTCACTCTCTTTATCTCCACGTTCCTCACCCTCCTCGCTATTTCCCTAAACTACTGGCTTGTCCCTGGAGGCTTTGCATGGAGAAACTATAAACAAAACACAAAACTCACTGGTCATATGGGGTGGCCCATACTAGGGACTTTGCCTCATATGGGTTCTCTTGCTCACGCAAAACTCGCTACTATAGCCACTTCGTTAAAGGCAAAAAGGTTAATGGCACTGAGTCTAGGTGCCACACCCGTTGTTATTAGTAGTCACCCTGAGACTGCTAGAGAAATTCTATTTGGTTCATCGTTCTCTGATCGTCCAATCAAAGAATCAGCACGCATGCTCATGTTTGAGCGTGCCATTGGTTTCGCTCCTTCTGGAACCTATTGGCGCCATCTACGTAGGATCGCAGCGTTCCACATGTTTTCTCCTAGGAGGATTCTAGGCTTTGAGAGTCTACGGCAACGTGTGGTTGATGAAATGGTGATGAGAACATGGAAGCAGATGGAGGAGAAAGGGGTGGTGGAAGTTCGAGGTGTGTTTCAGGAAGGGTCTCTTAGCAATATTTTGGAGTGTGTTTTTGGTACTAATTATGGGTCTTTGAGTTATGAAAATGAGGAGTTAGGAAATATGGTTAAGGAAGGGTATGAGTTGATTGCAAAGTTTAACTTGGAGGATTATTTTCCTTTGAAGTTTTTGGACTTTCATGGGGTGAAGAGAAGGTGTCATAAGTTGGCGGCCAAGGTGACTAGTGTGGTGGGTCAAATTGTTGAAGAACGAAGAAATAGAGCAGAAGATTTCGTTGGGGAGAATGATTTTCTTAGCACTTTGTTATCCTTGCCCAAAGAGGAAAGGTTGGGTGATTCAGATATGATTGCTGTTTTGTGGGAAATGATATTTCGAGGAACAGACACGGTTGCTATACTACTAGAATGGATCATGGCCAGGATGGTTTTACACCAAGACATACAAATGAAAGCCCGTCAAGAGATTGACACGTGCATAGGCCAAAACAGTCACGTGCGAGATTCAGATATTCCAAATCTTCCTTACCTGCAGGCCATAGTAAAGGAGGTTCTCCGACTGCACCCACCGGGCCCATTACTATCATGGGCCCGCCTAGCAATCCATGATGTCCACGTCGACAAGGTTCTTGTGCCAGCTGGCACAACAGCAATGGTTAACATGTGGGCCATATCCCATGACTCGACTATATGGGAGGACCCATGGGCTTTCAAGCCCGAGCGGTTCCTTAAAGAGGACGTATCCATCATGGGATCGGACTTGAGACTTGCCCCATTTGGCGCAGGACGTAGGGCATGCCCGGGTAGGGCCTTGGGCTTAGCCACAGTTCATCTCTGGCTCGCACAACTTCTCCACCAATTCATATGGCTTCCAGCGCAACCTGTTGATCTTTCAGAATGTCTTAGGCTTTCTCTCGAAATGAAGAAACCTCTTCGATGTCTAGTGGTTCACAGATAA 1572 0.4656 MKPTATFLSFLTPTLLGLLGATFQSTLSCYSCSLFTLFISTFLTLLAISLNYWLVPGGFAWRNYKQNTKLTGHMGWPILGTLPHMGSLAHAKLATIATSLKAKRLMALSLGATPVVISSHPETAREILFGSSFSDRPIKESARMLMFERAIGFAPSGTYWRHLRRIAAFHMFSPRRILGFESLRQRVVDEMVMRTWKQMEEKGVVEVRGVFQEGSLSNILECVFGTNYGSLSYENEELGNMVKEGYELIAKFNLEDYFPLKFLDFHGVKRRCHKLAAKVTSVVGQIVEERRNRAEDFVGENDFLSTLLSLPKEERLGDSDMIAVLWEMIFRGTDTVAILLEWIMARMVLHQDIQMKARQEIDTCIGQNSHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKVLVPAGTTAMVNMWAISHDSTIWEDPWAFKPERFLKEDVSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLAQLLHQFIWLPAQPVDLSECLRLSLEMKKPLRCLVVHR 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2104g00034 523 PRINTS E-class P450 group I signature 383 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS E-class P450 group I signature 425 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS E-class P450 group I signature 461 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS E-class P450 group I signature 471 494 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 CDD CYP78 101 516 - -
Gabi2104g00034 523 Gene3D Cytochrome P450 60 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS P450 superfamily signature 462 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PRINTS P450 superfamily signature 471 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 PANTHER CYTOCHROME P450 78A7-RELATED 31 523 - -
Gabi2104g00034 523 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Gabi2104g00034 523 FunFam Cytochrome P450 78A5 62 523 - -
Gabi2104g00034 523 Pfam Cytochrome P450 75 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi2104g00034 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 464 473 IPR017972 GO:0005506|GO:0016705
Gabi2104g00034 523 SUPERFAMILY Cytochrome P450 72 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2104g00034 Gabi-Chr2104 261822 264369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2104g00034 27 523 Cytochrome P450 AT1G13710 52.964 2.71e-178 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2104g00034 - - gmx:100817944 823.928