Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2104g00033 ATGCCAGTCTGCAGTTTGCACTGTACTTCAACCATGAATAAGAACATCCTCCAAAGTCCCGCACTTCTTAAGTATATCCTTGAAACGAGTGGCTATCCAAAAGAACACGAGCAATTGAAGCTAATCCGAGAGAACACCTTTAAGAAGTACGAGAGAACACAGGATCATATGATGAATGTGCCAGTGGATGAAGCCCAGTTCATATCTATTCTTCTAAAAATCATGAACGCGAAGAAAACACTAGAAATTGGAGTCTTCACTGGTTATTCTCTTCTTGCTACAGCTCTTGCTCTGCCTCCTGATGGAAAGGTAACAGCAATTGATGTGGATAGAGAAGCATACGAGCTTGGATTGCCCTTCATTCAGAAGGCAGGAGTGGAGCACAAAATTGACTTTATCCTTGGGGATGGATTATCAGCCCTCAATGATCTTATTGATGGCAAACAAGAAGAATCATTTGATTATATATTTGTGGACGCTGACAAGGAAGAATACATGAAGTATCACGATCTGCTGTTAAAATTGGTGAAGAAGGGTGGGATAATTGCATACGACAACACCTTATGGTATGGTTCAGTGGTCATGTCTGAGGACGATGACATAGATGATATCATAAGGAAGAAACGAAAGCCTTTGCTTGAATTCAATGCTTTTATAGCCAACGATTCTCGCATCGAATCAGCTCTTCTTTCTGTTGGGGATGGCGTAACCCTTTGTAGGTGTGTCTAA 729 0.4129 MPVCSLHCTSTMNKNILQSPALLKYILETSGYPKEHEQLKLIRENTFKKYERTQDHMMNVPVDEAQFISILLKIMNAKKTLEIGVFTGYSLLATALALPPDGKVTAIDVDREAYELGLPFIQKAGVEHKIDFILGDGLSALNDLIDGKQEESFDYIFVDADKEEYMKYHDLLLKLVKKGGIIAYDNTLWYGSVVMSEDDDIDDIIRKKRKPLLEFNAFIANDSRIESALLSVGDGVTLCRCV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2104g00033 242 CDD AdoMet_MTases 81 184 - -
Gabi2104g00033 242 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 15 242 IPR002935 GO:0008171
Gabi2104g00033 242 Pfam O-methyltransferase 28 240 IPR002935 GO:0008171
Gabi2104g00033 242 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 20 241 IPR029063 -
Gabi2104g00033 242 PANTHER O-METHYLTRANSFERASE-RELATED 11 240 - -
Gabi2104g00033 242 Gene3D Vaccinia Virus protein VP39 7 241 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2104g00033 Gabi-Chr2104 235160 243222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2104g00033 13 240 Monolignol Biosynthesis Gene Families AT1G67990 53.947 8.76e-86 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2104g00033 - - gmx:100500657 350.132