Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2104g00013 ATGGCGGCTGGGAGGCATGGGGGTTACCGCGACAACGAATTCAGGGACCGCGAGTCCAACTTGGATGTTTCTAGGCGTGGTTTCGCGAATTCGAAAGAAGAGTACGATCGGGTTCGGAATGGTGGCCGTGATGTTGTGAGAGGTGGGAGCAGGGATGCGAGAGATAGGATTAGGATGAGGCAGAGGGATATCAGGGAGAGAGAAACCGTTAATGGCAGCTACCGGTCATCTTCGAGTCGGAGTGACTCCGGCAGCAGTGGTGGCGGCCTTGGCCCTCGTCGGTGTGGGTTTTCTGTCAAGGCAATGGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGGTCTGATGATGCTATTGAATCAGAATCAGGGGTGAAAAACTGTGAGGTTGGTGTGTTTGAAGAAAACAGGACTCGGTCACCACCACCACCACCGGAGAGGAAAAGGAAATTTTCGCCTATAGTGTGGGATCAGGATGACAAGGAAGTGAACGAGTCATCCAAAGTTAGGGTTTCCTCCGCTGCTGTGACTGCTCTGCCTCCTCCACCTCCGCTGCCTAAAACGTTCCTTCAGTCGCAGTCACAATCGCCAAATGCAATGTGTGGTGGAGTTGAAATACATCCTGTCAGAAACAGAGAAACTGAGGATCTTGAGTTGCCGACAGCACCTAAGATTCCTCTGCCCTCTCCTTCAGGTTTGCATTCCTTGTCACCAAAACAGACTTGGGGTAATGATCAGGAAGCTGAGCAGCCAGAAGGTGAAGATTATGTTCCAACTCGTAACATATCTTCTTCAAGATGGGCAGCTGGTGATAACTCTCCTGGTGATGAGGGTGAAATCCTCGATGATGAGGAAATGCCTAAAAGAAGGAGGAGGCTGACTCCTGTGTTGTTGGATACTAGAGTAAGGAACAAGCTATTGAGCCCCGAGGAATCTAAAATAGAAGGTTTTGAAAGGGCTAGAGCTAAATCATCCGAGTCTGAAGAAAGAGGTATCCATGGAAGAATGTCCAGTGGTGATGATCATCCTGGTATTGAATCAGAGAAGGATGACTATATGGAGATTGATGCTCAAGGCAGGAAAAGTGAAACCAGCAACAGTCACTCAGATACGGATTCTGAAGATGCAGATGATAGCCGAGAGACTCCAGAACCTCCAGCTCCACCACAAAGAATGGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAATTTGAGAGATTGAACAAAATAGATGAAGGAACGTACGGTGTTGTATATAGGGCTAGAGATAAGAAGTCTGGGGAAATTGTAGCATTGAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGGTTCCCTCTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCACCCATCTATAGTTGACGTTAAGGAAGTAGTGGTAGGTAGTAGCCTTGATAGTATTTTCATGGTTATGGAATATATGGAACATGATCTTAAAGGACTAATGGAGGCAATGAAGCAACCATTTAGCCAGAGTGAAGTAAAGTGCTTAATGATCCAGCTTTTAGAAGGTGTGAAATATCTTCATGACAATTGGGTGCTTCATAGGGATTTGAAGACTTCGAACCTTCTTCTAAATAATAGGGGTGAGCTAAAAATTTGTGATTTTGGGTTGGCTCGTCAGTATGGGAGTCCTTTGAAACCATATACGCACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTAGGGGCAAAACAGTATTCAACAGCGATTGACATGTGGTCTCTAGGTTGTATAATGGCTGAGCTATTGTCTAAGGAACCACTATTTAATGGGAAAACAGAATTTGATCAACTTGACAAGATTTTCAGGATTCTTGGCACACCAAATAAAACAATTTGGCCTGGGTTCTCAAAATTACCTGGAGTCAAGGTCAATTTTGTCAAGCACCAGTATAACCTTCTCCGTAAAAAGTTCCCTGCTACATCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTCCTAACTTATGACCCTGAAAAGCGGATCACGGCTGAAGATGCTCTTAATCATGAGTGGTTCCGTGAAGTTCCTCTTCCTAAGAGTAAAGAGTTCATGCCTACATTTCCTGCTCAACATGCTCAGGACAGGCGGATGCGGAGAATATTAAAGAGTCCAGATCCTTTGGAGGAGCAGCGCCGGAAGGAGTTGCAGCAGGGTGAATCAGGGACTGGTGGAATTTTTGGCTAA 2256 0.4552 MAAGRHGGYRDNEFRDRESNLDVSRRGFANSKEEYDRVRNGGRDVVRGGSRDARDRIRMRQRDIRERETVNGSYRSSSSRSDSGSSGGGLGPRRCGFSVKAMDREPGELSSESGSDDAIESESGVKNCEVGVFEENRTRSPPPPPERKRKFSPIVWDQDDKEVNESSKVRVSSAAVTALPPPPPLPKTFLQSQSQSPNAMCGGVEIHPVRNRETEDLELPTAPKIPLPSPSGLHSLSPKQTWGNDQEAEQPEGEDYVPTRNISSSRWAAGDNSPGDEGEILDDEEMPKRRRRLTPVLLDTRVRNKLLSPEESKIEGFERARAKSSESEERGIHGRMSSGDDHPGIESEKDDYMEIDAQGRKSETSNSHSDTDSEDADDSRETPEPPAPPQRMVNMLQGCRSVDEFERLNKIDEGTYGVVYRARDKKSGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPSIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNKTIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEDALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRILKSPDPLEEQRRKELQQGESGTGGIFG 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2104g00013 751 SUPERFAMILY Protein kinase-like (PK-like) 397 702 IPR011009 -
Gabi2104g00013 751 Gene3D Transferase(Phosphotransferase) domain 1 488 729 - -
Gabi2104g00013 751 Pfam Protein kinase domain 405 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2104g00013 751 MobiDBLite consensus disorder prediction 1 392 - -
Gabi2104g00013 751 MobiDBLite consensus disorder prediction 71 86 - -
Gabi2104g00013 751 SMART serkin_6 405 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2104g00013 751 MobiDBLite consensus disorder prediction 8 70 - -
Gabi2104g00013 751 FunFam cyclin-dependent kinase G-2 isoform X1 390 487 - -
Gabi2104g00013 751 Gene3D Phosphorylase Kinase; domain 1 390 487 - -
Gabi2104g00013 751 FunFam Cyclin-dependent kinase G-2 488 727 - -
Gabi2104g00013 751 MobiDBLite consensus disorder prediction 233 247 - -
Gabi2104g00013 751 PANTHER CELL DIVISION PROTEIN KINASE 403 702 - -
Gabi2104g00013 751 MobiDBLite consensus disorder prediction 726 751 - -
Gabi2104g00013 751 MobiDBLite consensus disorder prediction 140 167 - -
Gabi2104g00013 751 ProSiteProfiles Protein kinase domain profile. 405 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2104g00013 751 ProSitePatterns Serine/Threonine protein kinases active-site signature. 525 537 IPR008271 GO:0004672|GO:0006468
Gabi2104g00013 751 MobiDBLite consensus disorder prediction 726 740 - -
Gabi2104g00013 751 CDD STKc_CDC2L1 399 696 IPR045267 GO:0004674|GO:0005524|GO:0006468
Gabi2104g00013 751 MobiDBLite consensus disorder prediction 282 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2104g00013 Gabi-Chr2104 71485 78901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2104g00013 396 742 Core Cell Cycle Gene Families AT5G10270 43.947 6.66e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Gabi2104g00013 Pkinase 2.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2104g00013 K08818 - gmx:100792524 1222.99