Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi209g00002 ATGGACAGCAGCGGCGGCGGCGGTAGAGAGTATAGCCAGATAGAGAAGGGAAGAGAGAGAAGGGGGAAGAGATGGTTACAACCAGCTTCACAAGTTGAAAACTATTCTGTTCAAGATTTGGGATTCAAGTTAATTGATCTACGGCAAAAGGGAGATAAACAAATTGGAGCTCCAAATAGAATGGTGGTGATATGGAGTGCCAATGGCACTGTAACGTTCACATATATGCAAGTTCATGAATGGCAAATAGCAATGGATGAGGCTCTTAGAAATCTAAGGGATACGCTCAAGACACTTTGTTGTCTGGATGGCTGGTCTTACGCCGTTTTCTGGCGCTTCCATCCACATAATTCCACGTTGTTGAACATGGAAGATGCATACTATGAAGATCCATTGGCAGAAGGGATAGTCAATAAGCTTCCACAGGTTCACTTGTTGGGAGAAGGAATTATTGGTCAAACTGCTTCCACGGGCAAGTACAGATGGATGCACTCAGATCATCAAACTGAAGAATCCAATTTGACTATCTGTGAGCAAGTTGATTCTGATTTGCATCAACAGTTCTCCTCTGGGATAAAGACAATTGTGGTTATATCCGTAGACAAACCATCGGGGGTGATACAATTTGGGTCCAAAAAGAAGATAATGATGACTATTAATAGGTTTAGACCTGACATTCAATACAGGAAGCAAGTTTTTGGATATGAATATAAAGAGATTCATATCTGTGATACTGGTGGTTTGGTCCTTAATACTCCTTTTCTTATTCCCATTAAGGACAAAATATTTATATCACGGAATATTACGCAGATTATGGAGAGAATAGGATTTTTGGAACAAACCCAAAGATTGCTCACTGGGATAGAAAATGAGGGAGTTCTTAGTTCATCAGCAAATACACTTCTCTCTCCGGATAGTGAAGATGATGATCTATATGGGTTGTTGGCTTCATTTTCCGCTGAAAATTTATATGACGGGAATCTCAAATATGTTCATTGTGATAACTCTGAAGTGCTAATGGGAAACACTTATTCTTCTGCAAATCCTGATGATTCCTTCCCTTCAATGTATAACATTCTTGAAGAAGGGATGAATCACATGCATGGAAATTCCTCTTGTCTAGGTGACCAATTGACCCCTGCCATAGAAGCTCAAGTGCTATCCTCAGATAGGGATAATATTACTATGATTTTGAAGCCAGGTTCTTCTATGAACAACTCTATTGATGAAAACCCCAGTTTTGGTACATGGAGTAGCGAAATTTCATCATTGGATGATACACTAGGCCAACAATTGGTATCTGAAATAAATGCTCAAGATATTGCAGATGTGCACTGCAAAGAAGCAAATGCATTTTCTTATGACAAACTTGCAGCTGAGGATCCAGCATTGACCTCATTGTATGGCATGAACAGACTGTTAGACCCAACAATAACATTTCCAAACCAATTAGGAAATTCAGTTGATAACCAACTTTCTGTTCAATCTAGCATTTTGTCAGAAGTTAATTTTCCTGATAGCTCAAGTAAGGTAAATGGACCGTCTATGAACTTAGAGCCAATTGATACTTTTGAAGAATTTCCTGAGTTATTCTCCGCAGATGATCTCAGCCAGTTGTTAGCTCTTTCTCCAGATGATAGTATTGACTTAACAGTGACTGCATTGAATAACACACTTTCTAAGTCACAAGAATTTAATCCCATTTCTTCTAGTCTGGTTGATAGTAGTGTTTTTGGTAATGTTCCAGTTACATGTTCAACTGTGCATAATTCCATAGCAGATACAGTCAACTTGGATAATCAACAAGCATCCACAGTTATGCATAGTTCTGGAAATATTTTATTTGATAGCTTGGGACTTGATTTGACATGTGACAAAATTGATGAGTGGTGGGCCAATATGCTTACACCAATGGTGAGTACAGCTGCTACTAATACTACTTTCTCTATTAGCAAATCTGAGTTGAATGTTGCTAGTGGCTCCAGGAAAAAATTATTCTCAGAGTTAGGACTTGATGGGATTTTGAATGGTCAAGCCAATTCCAATGCTTTGAATATTTATAAGGAGCAATTATCAACATATAAAAAGCAGAAGATAGAACATTCAACTGTAAACAGAAATCCAATTCAGTTGCCAAGTCTTGCTTTGTCTAGGAGCTCTAGAGTAGGCTTGTTGCAGCCAGTTTCTAAAGTGGACAGGATAAGCAAACTTGTACCCAAGAAAGAGATATTCCAAAAACCAGAGGTAGGAGGCTTGAGGATTGATGATAGACATGGCAACACTCGGAAGGTTGTTCCAACATACACTCAAAAACCAGTGGAACCCAATAAGGTCATTAAGAAGAGGGCTAAGCCAGGGGAGACAACTAGACCCCGACCAAAAGATCGTCAGCTGATTCAAGAACGCATTGAAAAGTTGCGAATGACCATCCCCAACTGTGGTACAAAGATTAGCATTGATGCTTTGTTAAGTCGCACCATCAGTTTCATGGTCTTCTTGCAAAGCATCACCAAGCATGCAGACAGGATACATGAGCCCTGTGAGCCTAAGCTCATAAAAGACACTAGGGAAGGAGATAGCATAAATGGTGGTGGTGGTGGTGGTGTTACATGTGCATTTGAAATGACGAGTCAAACGATGGTGTGCCCAATTATAGTGGAGGACATGGGTTCACCAGGCGTAATGCTTATAGAGATGCTTTATGAGGAGCGGGGTTCCTTACTTGAGATAGTGGACAAAATTAAGGGGATTGGGCTGAAAATCGTGAAGGGAAACATGGAAACCAGGGAGAAAAAAATATGGGCGCACTTTATTGTTGAGGTTAAAGTTGAGAAGGACAAGAGACCTGTAACAAGGATAGAAGTATTTAGAGAACTTCTACAACAAGCAAACACATTTGGAACTGATTATAAGCATAGTAATGCTATTGAAGGAGTTTACTTCCCATGGTCATGA 2955 0.3973 MDSSGGGGREYSQIEKGRERRGKRWLQPASQVENYSVQDLGFKLIDLRQKGDKQIGAPNRMVVIWSANGTVTFTYMQVHEWQIAMDEALRNLRDTLKTLCCLDGWSYAVFWRFHPHNSTLLNMEDAYYEDPLAEGIVNKLPQVHLLGEGIIGQTASTGKYRWMHSDHQTEESNLTICEQVDSDLHQQFSSGIKTIVVISVDKPSGVIQFGSKKKIMMTINRFRPDIQYRKQVFGYEYKEIHICDTGGLVLNTPFLIPIKDKIFISRNITQIMERIGFLEQTQRLLTGIENEGVLSSSANTLLSPDSEDDDLYGLLASFSAENLYDGNLKYVHCDNSEVLMGNTYSSANPDDSFPSMYNILEEGMNHMHGNSSCLGDQLTPAIEAQVLSSDRDNITMILKPGSSMNNSIDENPSFGTWSSEISSLDDTLGQQLVSEINAQDIADVHCKEANAFSYDKLAAEDPALTSLYGMNRLLDPTITFPNQLGNSVDNQLSVQSSILSEVNFPDSSSKVNGPSMNLEPIDTFEEFPELFSADDLSQLLALSPDDSIDLTVTALNNTLSKSQEFNPISSSLVDSSVFGNVPVTCSTVHNSIADTVNLDNQQASTVMHSSGNILFDSLGLDLTCDKIDEWWANMLTPMVSTAATNTTFSISKSELNVASGSRKKLFSELGLDGILNGQANSNALNIYKEQLSTYKKQKIEHSTVNRNPIQLPSLALSRSSRVGLLQPVSKVDRISKLVPKKEIFQKPEVGGLRIDDRHGNTRKVVPTYTQKPVEPNKVIKKRAKPGETTRPRPKDRQLIQERIEKLRMTIPNCGTKISIDALLSRTISFMVFLQSITKHADRIHEPCEPKLIKDTREGDSINGGGGGGVTCAFEMTSQTMVCPIIVEDMGSPGVMLIEMLYEERGSLLEIVDKIKGIGLKIVKGNMETREKKIWAHFIVEVKVEKDKRPVTRIEVFRELLQQANTFGTDYKHSNAIEGVYFPWS 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi209g00002 984 MobiDBLite consensus disorder prediction 1 23 - -
Gabi209g00002 984 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 140 218 IPR025610 -
Gabi209g00002 984 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 269 974 IPR043561 GO:0003700|GO:0006355
Gabi209g00002 984 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 783 833 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi209g00002 Gabi-Chr209 20251 31390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi209g00002 757 971 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 47.706 2.54e-51 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi209g00002 - - pvu:PHAVU_006G000400g 595.504