Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2099g00001 ATGGTTAGTGCTATAAAGGCAGCAATTGGAGATGCAGTGTTGACTTTCATGTGGGTGTTCTCCGCCTCCATGCTTGGAATAGCTTCAACCTCCATAACCAGAGCCCTTGACCTTCAGCACCTCTCTTACAACGGTTTCCCTTATCCTTCTTTTCTCGTCACTACTTTCCTTGTCTTCGTGCTCGTCTTCATCTTCACCATCATTGGCAATGCTTTCGGTGGCGCCAGCTTCAACCCCACCGGCACCGCCGCCTTTTACGCCGTTGGTCTCGGTTCCGACACCCTCTTCTCAATGGCTCTCCGTTTCCCTGCCCAGGCGCTTGGTGCTGCGGGTGGTGCTATGGCAATTATGGAGGTGATTCCTACGAAATACAAACACATGATTGGGGGACCTTCTTTGAAAGTGGACTTGCATACTGGGGCTGTTGCTGAAGGGGTGTTGACATTTTTGATTACTTTTGCTGTCCTTTTCATTATTCTGAAGGGCCCTCGTAGTGAGTTAGTGAAGACTTGGTTGGTGGCCATGTCAACCGTTACTTTGGTCATGGTTGGATCTGCTTACACCGGGCCATCCATGAATCCTGCCAATGCCTTTGGTTGGGCATACTTAAACAACTGGCACAACACATGGGACCAATTCTATGTATACTGGATTTGCCCCTTCACTGGAGCAATATTGGCTGCTTGGCTCTTCCGGGCTATCTTTCCCCCACCTGAACCAAAGCAGAAGAAAGCATGA 738 0.4959 MVSAIKAAIGDAVLTFMWVFSASMLGIASTSITRALDLQHLSYNGFPYPSFLVTTFLVFVLVFIFTIIGNAFGGASFNPTGTAAFYAVGLGSDTLFSMALRFPAQALGAAGGAMAIMEVIPTKYKHMIGGPSLKVDLHTGAVAEGVLTFLITFAVLFIILKGPRSELVKTWLVAMSTVTLVMVGSAYTGPSMNPANAFGWAYLNNWHNTWDQFYVYWICPFTGAILAAWLFRAIFPPPEPKQKKA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2099g00001 245 SUPERFAMILY Aquaporin-like 3 240 IPR023271 -
Gabi2099g00001 245 Gene3D Glycerol uptake facilitator protein. 1 244 IPR023271 -
Gabi2099g00001 245 PANTHER AQUAPORIN SIP1-1 4 243 IPR044222 GO:0015250
Gabi2099g00001 245 FunFam Aquaporin SIP1-1 2 245 - -
Gabi2099g00001 245 Pfam Major intrinsic protein 2 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2099g00001 245 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2099g00001 245 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2099g00001 245 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2099g00001 245 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2099g00001 245 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi2099g00001 245 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2099g00001 Gabi-Chr2099 7696 15255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2099g00001 2 245 Major Intrinsic Protein MIP AT5G18290 55.645 7.79e-84 248