Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2093g00004 ATGAATTCCATTCGCATAGTGATTGAGGATCTCTTAAAGCCTCATCTCGAAATCAAGCTCTTCAACCGATGGAGCTTCGAAGACATTCAGGTTAATGATATTTCTCTGGCTGATTATATTGGAGTGGTGGCATCCAAGCATGCAACATCTGTTCCTCACACTGCTGGTAGATTCTCGATCAGGAGGTTCAGGAAGGCACAGTGCCCCATTATTGAGAGGCTCACCAATTCTCTCATGATGCATGGTAGAAACAACGGCAAGAAGCTTATGGCTGTTAGGATTATCAAGCATGCCATGGAAATTATTCATTTGCTGAGTGACCTGAACCCAATTCAGGTTATTGTCGATGCTGTCATCAACAGTGGTCCTCGTGAAGATGCAACCCGAATTGGTTCTGCTGGAGTTGTTAGGAGACAGGCTGTGGATATCTCACCCCTTCGTCGTGTTAATCAGGCCATCTATCTTTTAACAACAGGTGCACGTGAAGCTGCTTTCAGAAATATTAAGACAATTGCTGAATGCCTGGCTGATGAACTTATTAATGCAGCAAAAGGTTCCTCCAACAGTTATGCTATAAAGAAAAAGGATGAAATTGAGAGAGTTGCCAAGGCGAATCGTTAA 621 0.4332 MNSIRIVIEDLLKPHLEIKLFNRWSFEDIQVNDISLADYIGVVASKHATSVPHTAGRFSIRRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLSDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2093g00004 206 PANTHER RIBOSOMAL PROTEIN S7 13 206 IPR000235 GO:0006412
Gabi2093g00004 206 Pfam Ribosomal protein S7p/S5e 64 206 IPR023798 -
Gabi2093g00004 206 SUPERFAMILY Ribosomal protein S7 18 206 IPR036823 -
Gabi2093g00004 206 NCBIfam 30S ribosomal protein S7 17 206 IPR005716 GO:0003735|GO:0006412|GO:0015935
Gabi2093g00004 206 CDD uS7_Eukaryote 19 206 IPR005716 GO:0003735|GO:0006412|GO:0015935
Gabi2093g00004 206 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 3 206 IPR000235 GO:0006412
Gabi2093g00004 206 ProSitePatterns Ribosomal protein S7 signature. 72 98 IPR020606 GO:0003723|GO:0003735|GO:0006412
Gabi2093g00004 206 FunFam 40S ribosomal protein S5 2 206 - -
Gabi2093g00004 206 Gene3D Ribosomal protein S7 domain 3 206 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2093g00004 Gabi-Chr2093 39757 51405 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2093g00004 17 206 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 90.526 2.28e-131 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2093g00004 K02989 - mnt:21410422 364.77