Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2091g00029 ATGAGGAAAAGGGAGAGGGAAAATCCTTGTGGGGTGTGTGGCCACTATCACAAATACGAAGAAGGGGAAGTGTGTTCGATTTGCGGCCACCGGATTCCGGTTGGATCGGAGAAAGCTTCGATACAAGTTAGCGCTTTCCCTTCGGTGATTTTGCCGGAATTTCTTTACCTTGGCAGCTACGATAATGCATCACGCTCGGAGCTTCTCAAGACTCAGGGAATTTCCCGCATCCTCAATACTGTCCCTTCTTGTCAAAATCTCTACAAGAATTCATTTACCTATCACTGCCTCCCAGATGACAAAACTTTACCATTTGATGAAGCAATTCAGTTTTTAGAACAATGTGAGAAGGATAAGGCACGTGTTCTGGTTCATTGCATGTCAGGAAAGAATAGGTCTCCAGCTATTGTGATTGCGTTCTTGATGAAGTCGAAAGGATGGAGACTCGAACAGAGTTATCAGTGGGTGAAGGAACAGAGACCTTCTGTTGAATTAACTGAAGGTGTCTACCAGCAACTACAGGAGTACGAGCACAAGATTTATGGATTTATTGATGGGGGTAGCTCTGTGCTGCCTGGTTTCCCATCATCTGCAGGGCCTCCTTCAATTAGCTTTGGCTTCCCAAAGATCGATATCAATGATTCAGCTCAACTTCTTGGCTTCAACAGTGCTGGAACTCCTTCTATATTCACCCGGGCACCCCTAGACATAGCTCCCACGGAGTTTACATTCGGAGCAGGTCAGACACAGAAGAGTGTGAGTGGAAGCCCATATAATCCAAATCCACCTAATCCAAATGGTTCTGATATCCAAATGGATGGTTCTTGA 828 0.4541 MRKRERENPCGVCGHYHKYEEGEVCSICGHRIPVGSEKASIQVSAFPSVILPEFLYLGSYDNASRSELLKTQGISRILNTVPSCQNLYKNSFTYHCLPDDKTLPFDEAIQFLEQCEKDKARVLVHCMSGKNRSPAIVIAFLMKSKGWRLEQSYQWVKEQRPSVELTEGVYQQLQEYEHKIYGFIDGGSSVLPGFPSSAGPPSISFGFPKIDINDSAQLLGFNSAGTPSIFTRAPLDIAPTEFTFGAGQTQKSVSGSPYNPNPPNPNGSDIQMDGS 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2091g00029 275 Pfam Dual specificity phosphatase, catalytic domain 55 178 IPR000340 GO:0008138|GO:0016311
Gabi2091g00029 275 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Gabi2091g00029 275 PANTHER PROTEIN-TYROSINE-PHOSPHATASE IBR5 1 275 IPR044212 GO:0009734|GO:0009738|GO:0033549|GO:0043407
Gabi2091g00029 275 Gene3D Protein tyrosine phosphatase superfamily 40 183 IPR029021 -
Gabi2091g00029 275 CDD DSP_plant_IBR5-like 47 176 - -
Gabi2091g00029 275 ProSiteProfiles Dual specificity protein phosphatase domain profile. 46 182 IPR020422 GO:0006470|GO:0008138
Gabi2091g00029 275 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 181 IPR029021 -
Gabi2091g00029 275 SMART ptp_7 83 185 IPR003595 -
Gabi2091g00029 275 MobiDBLite consensus disorder prediction 247 275 - -
Gabi2091g00029 275 FunFam Protein-tyrosine-phosphatase IBR5 36 185 - -
Gabi2091g00029 275 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 171 IPR000387 GO:0016311|GO:0016791
Gabi2091g00029 275 SMART dsp_5 46 179 IPR020422 GO:0006470|GO:0008138
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2091g00029 1 166 Protein tyrosine phosphatase (PTP) family AT2G04550 74.556 6.75e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2091g00029 K04459 - gmx:100808721 478.789