Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2091g00025 ATGGAGTTGGTAAGAAGTGTCTTCTCCAAAAATCGTTCTTTTGGGTCTCATGAAAGCAAAGTGAGACGCAATACTGTGGAAAATAGAAGATGGGTATCTGTTAGATCGTACTTGTGTGGCGACGAGTTCAATTCAGTCCTTGCAGAGGAAGATTCAGCTTCAGTTAAGAGCTCTGAAGCCACGGTTACACAGCCAATACCCGAGGAGTTGACTGATAAAGGAGACACCAAGAGTGAAGAAACTGTGGAGAATGTAACACAGAAAAGGCCAAATTCAAACACCAAATTATTGAATGAGGAAGAAGCAGCTATTCTTATTCAATCAGCATATAGAGGCTTCCTGCTTAGGCGTCAAAATGAAGAAATCAGATTGAAAACTGGTAAAGAAGAGCTCAATTTAGTAACAGAAAGTCCAGATAGCAAGTCCATGGGCACATCAGTTGAAGTCCAAACTGGGAACTCCACGGAAGTTTTCTCGGTTGAAGGAGAAAAAATGAGCATTTACCAGCGTATTCAACGCAGGACCAGAACTCAAGCAATAAAGCAAAAGGATGACTGGGATGACAGCACCGTGAGTAGCTATGTTTCAAAAATGAGGAGACAGAACAGAATGGAGGCAACAACCAGGAGGGAAAGAGCACTAGCTTATGCTTTCTCACAACAGTTACGAATTTGTTCAAAGAGAAAATCAACAAAATATAACAGCATGGAATCAAATATGAGCTGGAGCTGGCTTGAACGGTGGATGGCAACCCGTCTTCCAGACACCTCATCAGTTGAAAGCCATGCTATGAAGCAGTATGACCCTTTTATCAGTAATCACAAATTCACAATCAAGACAAGATTTTTAGATACTGCTGGGGAAGAAAAAGAGAGTTGTGGGTCAAATGAAGTGCCCTTTCATTTTGATAACTTATCAATAAATTCAAGAGAAGAAAAAGTTAGCTTCAAACCACCAACAGCGAAGACCAACTTTAAAGCTAGGAGAACTGTGTCAAGGCGGAAAACAGTGCCAAGTTATCAATTCCCTGAAGAGCAGCCAAAGGTAGGCAAGAGAGATGGTTCAAACAATGCTAGCAACGATATTAAGCAAAAACAAAAGCAACTAGGAAGCAAAACAGAAATGACATTTAGCACCTCCAAAGCTTCTGATGTGTAA 1158 0.4093 MELVRSVFSKNRSFGSHESKVRRNTVENRRWVSVRSYLCGDEFNSVLAEEDSASVKSSEATVTQPIPEELTDKGDTKSEETVENVTQKRPNSNTKLLNEEEAAILIQSAYRGFLLRRQNEEIRLKTGKEELNLVTESPDSKSMGTSVEVQTGNSTEVFSVEGEKMSIYQRIQRRTRTQAIKQKDDWDDSTVSSYVSKMRRQNRMEATTRRERALAYAFSQQLRICSKRKSTKYNSMESNMSWSWLERWMATRLPDTSSVESHAMKQYDPFISNHKFTIKTRFLDTAGEEKESCGSNEVPFHFDNLSINSREEKVSFKPPTAKTNFKARRTVSRRKTVPSYQFPEEQPKVGKRDGSNNASNDIKQKQKQLGSKTEMTFSTSKASDV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2091g00025 385 MobiDBLite consensus disorder prediction 352 385 - -
Gabi2091g00025 385 MobiDBLite consensus disorder prediction 51 65 - -
Gabi2091g00025 385 Pfam IQ calmodulin-binding motif 101 118 IPR000048 GO:0005515
Gabi2091g00025 385 ProSiteProfiles IQ motif profile. 99 128 IPR000048 GO:0005515
Gabi2091g00025 385 MobiDBLite consensus disorder prediction 51 91 - -
Gabi2091g00025 385 PANTHER IQ-DOMAIN 5-RELATED 30 349 - -
Gabi2091g00025 385 MobiDBLite consensus disorder prediction 313 385 - -
Gabi2091g00025 385 MobiDBLite consensus disorder prediction 70 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2091g00025 Gabi-Chr2091 242602 245339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2091g00025 3 341 IQD Protein Family AT5G35670 42.680 9.25e-85 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2091g00025 - - gsj:114383427 605.134