Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2091g00013 ATGGCCATTGACTGTGGCAAAGCTTCCCCGTCCAAGAATGTTTCCCCGAACCCAATCCATGTTCACGCCAAGGGTTTTGTCCACTGCGATATAAAGCTACAAAACATTCTTGTTTTCGACAATGATGATGTCAAGATTGCAAACTTTGGGTTTGCAAAGGAGACGGGGGAGAAACAGAGTAAAACAACGTGCGAGTGCAGGGGAACTCCTATGTTTATGTCGCCGGAGTCACTGAACAACAAGTGTGAGTCTCCGGCGGATATATGGGCTCTGGACTGTGCCGTGGTGGAGATGGTGACCCGAAAACCCGCTTGGAATGTGGGTAGCGGATCGAATATCTGGTCATTGCTATTTCGAATTGGGGTAGGTGAAGAATTGCCGCATGTTCCAGATGAATTGTCGCAACGAGGGAAGGATTTTCTTAGCAAGTGTTTTGTTAGGGATCGCAAGAAGAGATGGACGGCTAAGATGCTTTTGAAACACCCCTTTGTGGATGATGATGACAATGTTCCATTCAAGCACGTCAATGAGTTGTTGGAGCAAGAGGTAGAGCCATCGCCAAGAACTCACTGTGATTTCCCTCATTGTGCTTTCACTCCTGCTTCGTCCTATTTGCCTAGTTTATGTTCGCCGATGGATCGGCTCCGGCAACTGGTCACCGATCAGAGACCAATTGATTGGTCAGAAACAGACGGGTGGACTAGTGTGAGGGAAGGTTAG 720 0.4806 MAIDCGKASPSKNVSPNPIHVHAKGFVHCDIKLQNILVFDNDDVKIANFGFAKETGEKQSKTTCECRGTPMFMSPESLNNKCESPADIWALDCAVVEMVTRKPAWNVGSGSNIWSLLFRIGVGEELPHVPDELSQRGKDFLSKCFVRDRKKRWTAKMLLKHPFVDDDDNVPFKHVNELLEQEVEPSPRTHCDFPHCAFTPASSYLPSLCSPMDRLRQLVTDQRPIDWSETDGWTSVREG 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2091g00013 239 SMART serkin_6 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2091g00013 239 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2091g00013 239 SUPERFAMILY Protein kinase-like (PK-like) 20 206 IPR011009 -
Gabi2091g00013 239 Pfam Protein kinase domain 20 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2091g00013 239 ProSitePatterns Serine/Threonine protein kinases active-site signature. 26 38 IPR008271 GO:0004672|GO:0006468
Gabi2091g00013 239 Gene3D Transferase(Phosphotransferase) domain 1 19 188 - -
Gabi2091g00013 239 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 20 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2091g00013 Gabi-Chr2091 101515 102378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2091g00013 20 237 MAP Kinase Kinase Kinase AT5G67080 50.667 2.12e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi2091g00013 Pkinase 7.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2091g00013 - - aprc:113869133 284.263