Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2091g00002 ATGTCCAGAGAAAGGGAGAGATTTGATGAGATAGGCAAGAAGATAAAGAGGGAAGGAGATGATTCATCTCAAAAGGGAAGAAGACACATGTTGAGCTCTCCAGGAACGCTAAACACCACTACCCCTTGTGCTGCATGTAAGCTATTGAGACGAAGATGTGCACAAGAATGCCCCTTTTCTCCATATTTCTCTCCCCACGAGCCCCAGAAGTTTGCTTCTGTCCACAAAGTCTTTGGTGCCAGCAATGTCTCAAAGATGCTGATGGAGGTGCCCGAGGGTCAGAGAGCCGAAGCTGCAAATAGTCTAGTTTATGAGGCAAATGTAAGGCTAAGAGACCCAGTTTATGGATGCATGGGTGCAATTTCTTCTTTGCAACAACAAGTTCAATCTTTACTAGCTGAAGTTAATACCGTAAGGGAAGAAATACTTAAATACAAACTCAGGGAAGCTAACATGATACCCTCCTCTCATGTGATCATGCTACCTTCCTCAGAGGCTGTATCTATATCTGCTCCTCCACCTCCAACACCACCAACACTTCCTCTTCCTACAACTTCTTCCTCTTCTTCCGTTTACACCCAACAGACGGTTCATACCAATTATAGCATATTTTCAAATGATAATATTTCCTATTTTGGTTAA 642 0.4315 MSRERERFDEIGKKIKREGDDSSQKGRRHMLSSPGTLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPEGQRAEAANSLVYEANVRLRDPVYGCMGAISSLQQQVQSLLAEVNTVREEILKYKLREANMIPSSHVIMLPSSEAVSISAPPPPTPPTLPLPTTSSSSSVYTQQTVHTNYSIFSNDNISYFG 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2091g00002 213 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Gabi2091g00002 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 174 - -
Gabi2091g00002 213 MobiDBLite consensus disorder prediction 1 36 - -
Gabi2091g00002 213 MobiDBLite consensus disorder prediction 168 182 - -
Gabi2091g00002 213 MobiDBLite consensus disorder prediction 166 187 - -
Gabi2091g00002 213 MobiDBLite consensus disorder prediction 1 27 - -
Gabi2091g00002 213 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Gabi2091g00002 213 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2091g00002 Gabi-Chr2091 10945 11962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2091g00002 1 155 AS2 family AT2G30340 64.848 8.60e-71 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi2091g00002 LOB 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2091g00002 - - ccaj:109797870 320.857