Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2090g00015 ATGAATATCCTTTGCCCTGAAAGTGTTTCAGCCAATCAGAGAGCTTCTTCAGGGTCAGAAATCTGCAACACAGCTCAAGAGAAAATGGCAACGAAAGCTGAGATTGTATCTAAGGACACCATTAAGCCATCCTCTCCAACCCCAAATCATCTTAGAGACTTCAAAATCTCCCTTCTTGATCAATTGGCTCCTCCAATTTACGTTCCTGTTGTCCTGTTTTACTCTGCCTCTGATGTTACTACTTTCGGAAATGATATCAGAATGATATCTGACAAGTTAAAGTCTTCTTTATCAGATATCCTTACTCTCTATTACCCATTTTGTGGAACATTGAAAGGAAATTCATTGGTTGATTGCAACGATGTTGGTGTCCTTTACGTTGAGTCTAAAGTCCCAACTAAACTCTCAAATATTCTCAAAAATCCCCAAGTTCATGAGATAATTGAACTTTTTCCATTTGATCCCTACAACCCTTTAATATTATTAGATGATCATAGCAAGAAACCTGCTAGTAACATGGCAGTTCAAGTGAATGAATTCAGTTGTGGGGGGATAGGAATTGGTGTGTGCTTCTCACACAAGATTGCTGATGGTTCAACAGCTGCATCATTCCTCAATGCTTGGGCTGCAACATCAAGGGGACAACATGGAAACAACATATTGGAACAACCTCAAATTGAATCAGCCTCCTTGCTTTTCCCACCAAGGAACATAAACATGGACATAACTCGTGGCATGACTGGCCACAAAAACATTGTAACGAGGAGGTTCATATTTAATGACACAAACTTATCTAGACTGAGAGAAAAACTTGGCTGCTTCAATCCCACCCGTGTAGAAGCCGTGACAGCACTCATATGGAAATCAGCAACGGAAGCAGCAAGAGCAAGTTCATCTATGGTGTCTCATGCAGTGAACATTCGCAGTCGAATGGCCTCACCATTGTCGAAGAATTTGTTAGGAAATCTTTGGCAACAAGCTGCTTCACCAGTTATGGAAATGGAAAGGGTGAAAGGGTTGCATGATTTGGCAGAGATAGTAAGAAAAACGATAAGAAAAGTTGATGCAGATTATGTAAGTAAGCTTCAAGGTCATGAGTTACCTAAGGTTATTGAATCTTTACATGAAGCAAGGATAATGGTGTCCGAAAAAGGTATTTCATGTTATAGTTTTAGCAGTTGGATAAGATTTGATTTTTATGAAGCTGATTTTGGATGGGGAAAGCCAACCTGGGTGTGTACTATTGGTGTGCCTATTAAAAATGTGGTAATTTTGATGGCTACAAAAAATGGGGATGGAATTGAGGCATGGGTAACCTTGACTGAACATGATATGGTTGAATTTGAGCGCAATCCAGAACTTCTCGAGTTTGCATCATTTGATTTTTAG 1389 0.3967 MNILCPESVSANQRASSGSEICNTAQEKMATKAEIVSKDTIKPSSPTPNHLRDFKISLLDQLAPPIYVPVVLFYSASDVTTFGNDIRMISDKLKSSLSDILTLYYPFCGTLKGNSLVDCNDVGVLYVESKVPTKLSNILKNPQVHEIIELFPFDPYNPLILLDDHSKKPASNMAVQVNEFSCGGIGIGVCFSHKIADGSTAASFLNAWAATSRGQHGNNILEQPQIESASLLFPPRNINMDITRGMTGHKNIVTRRFIFNDTNLSRLREKLGCFNPTRVEAVTALIWKSATEAARASSSMVSHAVNIRSRMASPLSKNLLGNLWQQAASPVMEMERVKGLHDLAEIVRKTIRKVDADYVSKLQGHELPKVIESLHEARIMVSEKGISCYSFSSWIRFDFYEADFGWGKPTWVCTIGVPIKNVVILMATKNGDGIEAWVTLTEHDMVEFERNPELLEFASFDF 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2090g00015 462 Gene3D - 249 456 IPR023213 -
Gabi2090g00015 462 Gene3D - 29 241 IPR023213 -
Gabi2090g00015 462 PANTHER F21J9.9 34 459 - -
Gabi2090g00015 462 Pfam Transferase family 32 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2090g00015 Gabi-Chr2090 241590 252992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2090g00015 32 450 Monolignol Biosynthesis Gene Families AT5G48930 23.736 6.22e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2090g00015 - K13065 gmx:100792323 586.645