Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2085g00016 ATGAGACTTAGCTGCAATGGGTGTCGCATTCTCCGCAAAGGTTGCAGCGATGACTGCACCATCAGGCCCTGCCTTGAGTGGATCAACTCTCCTGAGTCCCAAGCCAACGCCACCCTCTTCCTTGCCAAATTCTATGGTCGCGTTGGCTTGCTCAACCTCATCAATGCTGCTCCACCACACTTTCGCCCAGCTGTGTTTAAGTCGCTGATGTACGAGGCATGTGGGAGAATTGCGAACCCGGCTTATGGGTCACTGGGTTTGTTCTGGACCGGTGAGTGGGCCCGATGCCAAGCTGCTGTTGATGCTGTGCTGATTGGATCCGAGATCAATGTCATGGAACCTTCTGTTTGGCAGCTGACGGGGACACGTGGCAGTGAGCATGTTCTCCAAGCCCGTGGTATACGCCACGTGTCCAGAGACACTGACATGGACCAATTGAAAGGAAGGGCCCGGTTCAAGAGGACCGGGAATGTGATCAGGCCCAAAGCGAGAGTGGGCTCAGTCGACTCGTCCGCGCTGTGGAAACCGGTTTCTAATGATGAGCCGGGAAACAAAGGGGGAGGATGTGTGAGTAGTGGGAGCGATGAAACAGTGGAGGCTTCGTTGATGAACCAAAACCGAATGGGTGAGGGTGATGCTGAAGTGGAGCTGGATTTGGAACTCACTCTTGGCGGAGGCGGCTTCTGTCGTTTCCCGCATTGA 702 0.5484 MRLSCNGCRILRKGCSDDCTIRPCLEWINSPESQANATLFLAKFYGRVGLLNLINAAPPHFRPAVFKSLMYEACGRIANPAYGSLGLFWTGEWARCQAAVDAVLIGSEINVMEPSVWQLTGTRGSEHVLQARGIRHVSRDTDMDQLKGRARFKRTGNVIRPKARVGSVDSSALWKPVSNDEPGNKGGGCVSSGSDETVEASLMNQNRMGEGDAEVELDLELTLGGGGFCRFPH 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2085g00016 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 221 - -
Gabi2085g00016 233 MobiDBLite consensus disorder prediction 173 195 - -
Gabi2085g00016 233 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Gabi2085g00016 233 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2085g00016 Gabi-Chr2085 245836 246913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2085g00016 1 223 AS2 family AT3G02550 45.494 2.84e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi2085g00016 LOB 1.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2085g00016 - - gmx:100789066 281.182