Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2085g00007 ATGAGATTACCCTTTTTCTCAACGAACACACACCACTATTCATTTCCCCTTTTCGCCACCGGCATCGTGCACAGGCCGCGGTGGCCGCGCATGAACGCCGCTCTTTCTTTCCGGCGCCGCCATCGCCGGAAAGACAAGGTGGTAGTCATCATGGGCGCTACCGGCACTGGAAAATCGCGCCTCTCCGTCGACCTCGCCACCCTCTTCTTCCCCTTCTTCGAAATCGTGAACTCCGATAAAATGCAAGTCTATAATGGCCTCGACATCACCACCAACAAGATTCCCATTGAAGAACGCAACGGTGTGCCTCACCACCTTCTTGGTAAGTTCGACCCTAAGAACGGCGAGTTAACCCCTTTGGAGTTTCGCCGGATCGCTGGTGAAGTCGTCGCCGACATTACTTCCCGGAGGAAACTTCCCATCGTCGTCGGAGGGTCCAACTCGTTCATTCATGCTCTTCTCGTTGAACGTTTTGACCCCGAGTTGAACGTGTTTGATGAGACTTCGCTCACGATTGTCCCTGAGTTAACTCAGTTCAGGTACGAGTGCTGCTTCCTCTGGGTGGATGTTTCGTTCCCTGTGTTATCGGATTATTTGTTGAAGCGAGTTGACGACATGCTTGACTCGGGGATGGTGGACGAGTTGGCCGAGTTCTTTGACCCGGAAACGGGCGATTTGGAAGTTGACTCGGCGAGTCCGAGTGGATTGAGGAAGGCAATTGGGGTGGCGGAGTTCGACCGTTATTTGAAGGAATACCCGCCACCGTTGGGGTTCCGAGGTTGTTGGGAGAAAGAGGGGGAGAATCGCATGCGGAATGGTGCATACGAGGGTGCTGTGAGGGCGATCAAGGACAAAACGTGTCATCTGGCGAAGAGGCAGATAGGGAAGATCCTGCGGTTAAAAAGGGCGGGGTGGGACCTACGGAGATTGGACGCCACGGCGGCGCTCAGCGACGGAGGAAGGAGGTCGGAGATTTGGGAGAGGGAGGTGTTGGAACCGAGCGTGAAGATTGTGAAGCTGTTCATGAAGGAGTAG 1035 0.5449 MRLPFFSTNTHHYSFPLFATGIVHRPRWPRMNAALSFRRRHRRKDKVVVIMGATGTGKSRLSVDLATLFFPFFEIVNSDKMQVYNGLDITTNKIPIEERNGVPHHLLGKFDPKNGELTPLEFRRIAGEVVADITSRRKLPIVVGGSNSFIHALLVERFDPELNVFDETSLTIVPELTQFRYECCFLWVDVSFPVLSDYLLKRVDDMLDSGMVDELAEFFDPETGDLEVDSASPSGLRKAIGVAEFDRYLKEYPPPLGFRGCWEKEGENRMRNGAYEGAVRAIKDKTCHLAKRQIGKILRLKRAGWDLRRLDATAALSDGGRRSEIWEREVLEPSVKIVKLFMKE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2085g00007 344 Gene3D - 44 342 IPR027417 -
Gabi2085g00007 344 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 44 341 IPR039657 -
Gabi2085g00007 344 Pfam IPP transferase 82 156 - -
Gabi2085g00007 344 Pfam IPP transferase 178 294 - -
Gabi2085g00007 344 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 192 307 - -
Gabi2085g00007 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 223 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2085g00007 Gabi-Chr2085 115674 116708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2085g00007 180 343 C2H2 Transcription Factor Family AT2G27760 27.072 9.82e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2085g00007 K10760 - qsa:O6P43_032737 434.106