Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2084g00006 ATGGCCGAATCTCTCCTCTTCAGTGTCGCAGAATCACTCGTTGGGAAGCTTGCTTCTACTGCTGTTCAAAAAGCTTCCGAGGTGCTCTGTGTGTACGACGATGTGCAAGGGCTCAAAGAAACTGTGTCATTCATCAAAGCTGTCCTGTTGGATGCAGAGCAAAAGCCGCAGAAGAGCAATGAGCTGCGTGCGTGGCTGAGACAGATTAAGCGTGTTTTCTCTGATGCTGAAGACATAATAGATGATTTTGAGTGTGAAACTTTACGTAAGCATGTGGTCAACACTTACGGTAGCTACACAAGGAAGGTGCGCCGGTTTTTCTCAACATCTAATCCTCTTGTTTATCGTTTTAGAATGGCACATCATATCAAAGATATTAAAAAGAGGTTAGACAAGGTTGCTGCTGACAGGGATAAGTTTGGTCTTCAGATCAAAGATATTGACACACGTGTTGTGCATAGGAGGGAAATGACTCATTCCCATGTAGTTGCTTCAGATGTGATAGGAAGGGAACATGATAAAGAAAAAATTATAGAGCTTTTGTTGCAAGATGGTACTGAAGCTAGAAGTCTCTCTATTATCCCCATTGTGGGAATTGGTGGCTTGGGAAAGACTACACTTGCAAAGTTGGTCTTCAATGATAAGATTGTAGATGAGTCTTTTCCGTTGAAGATGTGGGTCTGTGTCTCTGACGATTTTGAACTTGAGGATATGCTTCGTAAAATCCTCAAATCTGCTAAGGATAGTAGTACGCCTTCTTCTACCCTAACTCGCCAAGAGAGCTTTAAAAACTGTGAAATGGAGCAACTCCAACATCTTCTAACAAGTAAACTTGCCGGAAAAAAGTTCTTGCTTGTCCTGGATGACGTGTGGAATGAGGATCGTGTTAAATGGCTGAAGTTGAAGGATTTACTACAAGGAGGTGCTGAAGGAAGTAAAGTCTTGGTGACTACACGTAGCCAATCAATTGCTAACATGATGGGCACTAATTCATCTTACGGTTTACAAGGTCTTTCTGAAGATGATTCATTGTCCCTATTTGTCAAATGGGCTTTTAAAGAAGGAGAAGAGACAAAATATCCAGAATTGTTGGAGATTGCGAAAGAAATTGTGGAAAAATGTGGAGGCCTTCCTTTGGCAGTGAGAACATTAGGGAGTTCACTATTCTTAAAAGTTGATAAAGAAGAGTGGGTTTCTGTCAGAGACAATGAGATTTGGAATTTACCATCAAAAGAAGGTGACATTTTACCTGCTTTAAAATTAAGTTATGATCAACTACCATCATATTTAAAACCATGTTTTGCTTGCTTCTCCCTTTGTCCCAAGGATTATTTTTTCACTGATTATGAGGTTACTGGGCTTTGGGAGTCACTTGGTTTTCTTCCGTCACCAAACAAAAACAAAACATTGGCAGATGTTGGCATCCAAATTTTGCGTGAGCTACAATCAAGATCTTTTCTTCAAGATTTTATTGACCATGGTACTTTTGTTCAGTTTAAATTACACGATTTGGTGCATGATCTTACAATGTATGTTGCAAAAGACGAGTTTCATCGCTTAAATTCTTGCAGTCAGAAAATATCTGAGAATGCCCGGCATTTGTTTTTCACCAAAAATGATTTGCTTGGTCAAACTTCCATTCCAAGTGGTTTGAGAACGATAATTTTGCCTGCGGGAGCCAATAATGAAGCTTTCTTGAATACATTAGTATCAAGGTGCAAATACTTGCGGTTTTTAAATTTAAGTGGATCTGAATATGAGAGTTTGCCCTGCTCCATTGGGAAGTTGAAACATTTGAGATTTCTATCTCTTGACTCTAATGAAAAACTTAAGAGACTCCCTACTTCAGTATGCAAGCTCCAAAATCTACAAGCTTTGTACTTCGGTGGATGCACTAAGTTAAAAACTTTGCCCAGAGGAATTGGAAACTTGATTAGCCTTCGAGAGTTGAGTGTAAGCACAAAGCAATCTGTTTTCCCAGACAAAGAAGTTGCAAAATTGACTTCTCTAGAAATTTTAACTTTATCTTATTGTGACAATATGGAGTCATTGTTCCAAGGGGTGCAACTTCCTACCCTTAGATGGTTGACTATTGATTCTTGTGGTAGTCTAAAGTCTTTGCCATTTCATGCTACTCCAAATCTAGAGAGTTTGGTTATTGGCGGGTGCAGTAAGTTGGAAATGTCGAAGTGCCTTGATAACCAAATCATTGAGTTAAGGTTAAAGTATCCACATCTTTGTGATTTGCCGCAGCTGGTGACTTTGCCTCCATGGATTCAAAGATATGCGAATACATTACATTCCTTGAACATTGAAGGGTGTGACAATATTAAGGAGCTTCCCGAGTGGCTGCCAACTCTTGTTTGTCTCAAAACACTTATTATTCTCTATTGTCCAAAGTTGCTTTCACTCCCCGATGACATGCTTGTTTCCACCAACCTTGAATACTTACGTATTGAATATTGTCCGGAATTATGTAGAAGATACCAGCCAGAAGTTGGAGAGAATTGGCCCAAAATATCACACATCAAAAGAATATACATTGGTGAACCAGAATAG 2559 0.3943 MAESLLFSVAESLVGKLASTAVQKASEVLCVYDDVQGLKETVSFIKAVLLDAEQKPQKSNELRAWLRQIKRVFSDAEDIIDDFECETLRKHVVNTYGSYTRKVRRFFSTSNPLVYRFRMAHHIKDIKKRLDKVAADRDKFGLQIKDIDTRVVHRREMTHSHVVASDVIGREHDKEKIIELLLQDGTEARSLSIIPIVGIGGLGKTTLAKLVFNDKIVDESFPLKMWVCVSDDFELEDMLRKILKSAKDSSTPSSTLTRQESFKNCEMEQLQHLLTSKLAGKKFLLVLDDVWNEDRVKWLKLKDLLQGGAEGSKVLVTTRSQSIANMMGTNSSYGLQGLSEDDSLSLFVKWAFKEGEETKYPELLEIAKEIVEKCGGLPLAVRTLGSSLFLKVDKEEWVSVRDNEIWNLPSKEGDILPALKLSYDQLPSYLKPCFACFSLCPKDYFFTDYEVTGLWESLGFLPSPNKNKTLADVGIQILRELQSRSFLQDFIDHGTFVQFKLHDLVHDLTMYVAKDEFHRLNSCSQKISENARHLFFTKNDLLGQTSIPSGLRTIILPAGANNEAFLNTLVSRCKYLRFLNLSGSEYESLPCSIGKLKHLRFLSLDSNEKLKRLPTSVCKLQNLQALYFGGCTKLKTLPRGIGNLISLRELSVSTKQSVFPDKEVAKLTSLEILTLSYCDNMESLFQGVQLPTLRWLTIDSCGSLKSLPFHATPNLESLVIGGCSKLEMSKCLDNQIIELRLKYPHLCDLPQLVTLPPWIQRYANTLHSLNIEGCDNIKELPEWLPTLVCLKTLIILYCPKLLSLPDDMLVSTNLEYLRIEYCPELCRRYQPEVGENWPKISHIKRIYIGEPE 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2084g00006 852 SUPERFAMILY L domain-like 494 840 - -
Gabi2084g00006 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 436 IPR027417 -
Gabi2084g00006 852 Gene3D - 337 427 IPR042197 -
Gabi2084g00006 852 Pfam Rx N-terminal domain 10 98 IPR041118 -
Gabi2084g00006 852 CDD RX-CC_like 8 134 IPR038005 -
Gabi2084g00006 852 Gene3D - 149 333 IPR027417 -
Gabi2084g00006 852 PANTHER DISEASE RESISTANCE PROTEIN RP 49 822 IPR044974 GO:0006952
Gabi2084g00006 852 PRINTS Disease resistance protein signature 374 388 - -
Gabi2084g00006 852 PRINTS Disease resistance protein signature 665 681 - -
Gabi2084g00006 852 PRINTS Disease resistance protein signature 193 208 - -
Gabi2084g00006 852 PRINTS Disease resistance protein signature 277 291 - -
Gabi2084g00006 852 Pfam NB-ARC domain 170 423 IPR002182 GO:0043531
Gabi2084g00006 852 Gene3D - 10 124 - -
Gabi2084g00006 852 Gene3D Ribonuclease Inhibitor 739 838 IPR032675 -
Gabi2084g00006 852 Gene3D Ribonuclease Inhibitor 513 738 IPR032675 -
Gabi2084g00006 852 FunFam Probable disease resistance protein At1g61300 149 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2084g00006 Gabi-Chr2084 192979 195537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2084g00006 176 801 WRKY Transcription Factor Family AT5G45050 23.314 1.77e-17 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2084g00006 - - gmx:100780033 1066.6