LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi2077g00029	ATGGCTGCTTATTTTCAGTGTTTCTGGGGTCTATTTCTCTCACGGTCGATTTATTTTGTTCAATCAACGTCAGCTCCACAAGTCTATATAGTATATTTGGGACTCAACCATATTAGCGATCCCGGCCTCACATTTCGTTACCACCTTCAACTTCTATCTACTGTGTTCACATGTGAAAAAGATGCGGAACGTTCGATTCTCTATAGCTACAAGTATGGTCTCTCAGGGTTTTCAGCAATGCTCAATCCAACCCAAGCAGCCACACTAGCTAATATGCAAGAAGTGGTGTCAGTTTTCAGGAGCCAGTCATCACAGTCACACACAACAAGAAGCTGGGACTTCTTGGACCTTACGTTGGACAATAGTGAAGTGACTCCATTGCAGCTAATTTATGGCGAAGACATCATTGTTGGGGTATTCGACACAGGCGTATGGCCAGAATCTGAAAGTTTCGAGGAAGATCCAAGCATCGGTCCTATTCCATCAACTTGGAAGGGGGAGTGTGTTGAGGGGGAGAGGTTCGACCCTGCAACAGCATGCAGCAACAAGTTAATTGGTGCTCGTTACTACCTGAAAGGTTTTGAACAAGAATATGGACCACTTAATACAACAGAGAACTTTGAGTATCAATCACCTCGGGATTTTGTTGGCCATGGAACACACACAGCTTCAACAGCAGTAGGGTCCGTAGTGGAAGATGCAAGTTTCTTTGACTTAGGAAAGGGCACTGCCAGGGGTGGTGCTCCAAGGGCACGTTTGGCGGTTTACAAAGTATGCTGGAACATAGAATATTATGGAAGGTGCTCAGAAGCAGATATAATGGCAGCTTTTGATGACGCTTTGCATGATGGAGTTCACATTATCTCGGCCTCCTTTGGTCCAATTCCGCCACTGGCTCCCTTCTTCAAAGACAGCTCAAGTATTGGTTCGTTCCATGCCATGCAGCTCGGTGTAACAGTTGTATTCTCCGCTGGAAACTATGATGTGTCACCCGAACCATATCTTGTTGGAAATGTTGAACCATGGTCCATTTGCGTTGCCGCTTCATCAGTTGATAGAATATTCCCCACAAAAATAATCATTGGTGATAATCTTTACACGGGAGAAAGCTTAATTACCACACAAATAAAGGCAAAATTGGCAGATGCAAGCACATACTTTTACAATGGGATCTGCAAGATAGACTATATTAAGCCATCAAAATCAGGTGCAGGAAGGATTGTGCTCTGCTTCTCTACAATAGGACCAACATTAAGTCTAGAAGCAGCTACAGCAGCGAAGGCAGTGAATGCAACGGGATTGATCTTTGTGGAACCTATGTCAAGGCAATTACCTGATATTGATGTAGTTCCTACAGTCCTTGTCAATTTGGAAGAAGGGACTAAAATTAAGTATTTTCTTGCTGAATCTCCCAGGCTCCCAAAAGTGCAGATAGAACCAAGTAAAACAGTCATTGGCAAGGCACCTGCGCCCACAATTGCATATTTTTCGTCTAGAGGGCCAAGCTCAATAACACCCGACATTCTCAAGCCAGACATTAGTGCTCCAGGAGTAAACATTTTAGCAGCATGGCCTCCCGAAACTCCACCGTCGTCATCATCCAGCGACGGACGTTCTGTGAGATGGAATTTTCAGTCAGGAACATCAATGGCATGCCCTCATGTAGCCGGTGTTGCAGCGCTTATCAAATCAGCACATCCAAACTGGTCTCCTGCTGCCATTAGGTCTGCTCTCATGACAACAGCAAATACTCTGGATACAACCATGGACAGTATTCTTGCTGGTGGATCAATGAAAGTAGCGGATAACTTCGACATGGGTGCTGGCAACTTAGACCCTACAAAAGCAGTTGATCCAGGACTAGTCTACGACATAAAATCTACTGATTATATTATTTTCCTATGCAATATGGGCTTTACACGAGAGAAGATAAACAAGATCATTAGTCTTCCCTCTCCAGATCCTGTTGAGACAAGCTGCAAACACTTAGTAGCCAAAACCAATGCCATTCTGAACTACCCATCGATCACAATCTCGAACCTCAAGTCCACAATAACAATGAAAAGGACTGTTCGTAATGTGGGTCGAAACAAAAATGTCATATATTTTGTTAGCATCATCGAACCCTGTGGAGTGGAGGTTGTGATATGGCCAAAGATCCTAATATTCTCATGGTTCAAGCAAGAAAACTCATACTATCTGACATTAAAGCCCATAAAGAAATCCCAGGGGAGGTATGATTTCGGAGAGATAGTTTGGTCAGACGGCTTCCATTATGTTAGGAGTCCATTGTCTGTACGTATCAACAATACTTCTGGTTCTGGTTCTGGTTCTGGTTCTGATGGATCCAACTAA	2355	0.4378	MAAYFQCFWGLFLSRSIYFVQSTSAPQVYIVYLGLNHISDPGLTFRYHLQLLSTVFTCEKDAERSILYSYKYGLSGFSAMLNPTQAATLANMQEVVSVFRSQSSQSHTTRSWDFLDLTLDNSEVTPLQLIYGEDIIVGVFDTGVWPESESFEEDPSIGPIPSTWKGECVEGERFDPATACSNKLIGARYYLKGFEQEYGPLNTTENFEYQSPRDFVGHGTHTASTAVGSVVEDASFFDLGKGTARGGAPRARLAVYKVCWNIEYYGRCSEADIMAAFDDALHDGVHIISASFGPIPPLAPFFKDSSSIGSFHAMQLGVTVVFSAGNYDVSPEPYLVGNVEPWSICVAASSVDRIFPTKIIIGDNLYTGESLITTQIKAKLADASTYFYNGICKIDYIKPSKSGAGRIVLCFSTIGPTLSLEAATAAKAVNATGLIFVEPMSRQLPDIDVVPTVLVNLEEGTKIKYFLAESPRLPKVQIEPSKTVIGKAPAPTIAYFSSRGPSSITPDILKPDISAPGVNILAAWPPETPPSSSSSDGRSVRWNFQSGTSMACPHVAGVAALIKSAHPNWSPAAIRSALMTTANTLDTTMDSILAGGSMKVADNFDMGAGNLDPTKAVDPGLVYDIKSTDYIIFLCNMGFTREKINKIISLPSPDPVETSCKHLVAKTNAILNYPSITISNLKSTITMKRTVRNVGRNKNVIYFVSIIEPCGVEVVIWPKILIFSWFKQENSYYLTLKPIKKSQGRYDFGEIVWSDGFHYVRSPLSVRINNTSGSGSGSGSDGSN	784

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi2077g00029	784	Gene3D	-	634	769	-	-
	Gabi2077g00029	784	Pfam	Fibronectin type-III domain	671	766	IPR041469	-
	Gabi2077g00029	784	SUPERFAMILY	Subtilisin-like	107	621	IPR036852	GO:0004252\|GO:0006508
	Gabi2077g00029	784	ProSitePatterns	Serine proteases, subtilase family, serine active site.	547	557	IPR023828	-
	Gabi2077g00029	784	Pfam	Subtilase family	132	586	IPR000209	GO:0006508\|GO:0008236
	Gabi2077g00029	784	CDD	Peptidases_S8_3	107	583	IPR034197	-
	Gabi2077g00029	784	Gene3D	Peptidase S8/S53 domain	134	630	IPR036852	GO:0004252\|GO:0006508
	Gabi2077g00029	784	PRINTS	Subtilisin serine protease family (S8) signature	132	151	IPR015500	-
	Gabi2077g00029	784	PRINTS	Subtilisin serine protease family (S8) signature	546	562	IPR015500	-
	Gabi2077g00029	784	PRINTS	Subtilisin serine protease family (S8) signature	214	227	IPR015500	-
	Gabi2077g00029	784	Gene3D	-	352	485	-	-
	Gabi2077g00029	784	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	14	107	IPR037045	-
	Gabi2077g00029	784	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	61	765	IPR045051	-
	Gabi2077g00029	784	ProSiteProfiles	Serine proteases, subtilase domain profile.	111	617	-	-
	Gabi2077g00029	784	FunFam	Subtilisin-like protease SBT1.5	134	361	-	-
	Gabi2077g00029	784	Pfam	Peptidase inhibitor I9	28	104	IPR010259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi2077g00029	Gabi-Chr2077	240135	244573	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi2077g00029	58	770	Subtilisin-like Serine Gene Family	AT4G26330	59.028	0.0	839

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi2077g00029	-		-	qsa:O6P43_022039	1158.28