Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2077g00019 ATGAGAGGAAGGAGTTATAGTCCATCGCCTCCACCAGCGAGGGGTTATAGCAGAAGAGGGAGGAGTCCAAGCCCTAGGGGCCGTTATGCTGGCCGTCCTAGAGATCTCCCTACCAGCCTTCTTGTTCGTAACCTTCGCCATGACTGTAGGCCCGAGGATCTTCGCAGACCTTTTGGTCAATTTGGTGCTCTTAAGGACATTTACCTGCCTAAGGATTATTATACTGGAGAACCCCGTGGTTTTGGTTTTGTCCAATATGTGGATCCTGCTGATGCGGCTGATGCTAAATATCACATGGATGGCCAAATTCTTCTTGGTCGGGAGTTAACTGTGGTATTTGCTGAGGAGAATAGAAAGAAGCCAACTGAGATGAGGACAAGAGAGAGAAGGGGTCGCTTTTCTGATCGAAGAAGGTCTCGTTCGCCCCGCTACTCCCGATCCCCACCACCACGTCATAGATCTCGCTCTCGCAGTCGTGACTATTATTCCCCTCCTCCCAAACGAAGGGAATATTCAAGGTCTGTGTCACCTCAGGACAGAAGATACAGTCGAGAAAGATCATATTCACAGCATAGTAGAGAGAGGTCATACTCACGCTCTCCACCCTATAATGGGGGCCCAAGAAGTCGTAGTCTGAGTCCAGGGAAGGGCCCAGGTCGGAGCAGAAGTCCAAGTCCAAACCTTGATGTTAGGGAATCAGCCCGTGGTAGGTCCCCCAGTCAGTGA 726 0.5083 MRGRSYSPSPPPARGYSRRGRSPSPRGRYAGRPRDLPTSLLVRNLRHDCRPEDLRRPFGQFGALKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPTEMRTRERRGRFSDRRRSRSPRYSRSPPPRHRSRSRSRDYYSPPPKRREYSRSVSPQDRRYSRERSYSQHSRERSYSRSPPYNGGPRSRSLSPGKGPGRSRSPSPNLDVRESARGRSPSQ 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2077g00019 241 MobiDBLite consensus disorder prediction 1 37 - -
Gabi2077g00019 241 MobiDBLite consensus disorder prediction 131 153 - -
Gabi2077g00019 241 SMART rrm1_1 39 112 IPR000504 GO:0003723
Gabi2077g00019 241 MobiDBLite consensus disorder prediction 118 241 - -
Gabi2077g00019 241 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 109 IPR000504 GO:0003723
Gabi2077g00019 241 Gene3D - 31 222 IPR012677 -
Gabi2077g00019 241 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 116 IPR000504 GO:0003723
Gabi2077g00019 241 MobiDBLite consensus disorder prediction 154 193 - -
Gabi2077g00019 241 SUPERFAMILY RNA-binding domain, RBD 9 129 IPR035979 GO:0003676
Gabi2077g00019 241 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 37 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2077g00019 Gabi-Chr2077 133203 135907 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2077g00019 38 164 Eukaryotic Initiation Factors Gene Family AT4G34110 28.125 2.33e-09 55.5