Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2077g00015 ATGATTGAGTTCACTTCCAAGACTTGCTCGGACCCGCTTAAGCAGCTCAATGAATTTTTCAGTTTCGTGAAGGGGTCGCTTCAGCTGGATGCTTCCGTTTTCCAATTAGAAAAGAAGATTCGAAGGTTGAAGAAGAAGTTTATCAACAATGTAGAAAAGGGGAAGAAACATAAACCTCACGAGCATAGGTTATTTGAATTATCTAAAAATATTTGGGCCAGTGAAGTTGCCGAAAAGGAAGATAGTAATAGTAACTCTGCCACTTCTTCACAGATTTCAAAACCTGAAACAAATGTGGTTTTCAATGAAATGATTAGGTTTATAAACAATGGTAGTATGTTGAATGAGAATGTGATAAGGGGGAGACTAGAATTAGTGGGAGAATCAAAGAGGGAAGAGTTGGAGGTGGGGTGGAGTGCATTGCTAGCTAAAAAGTTAGAATTGTTTGCGAAACGTGCACGACTGATAAAGGATCAAACTAGGTTGATGTTGGAGGCGCACAAGTCATCAAACCATTAG 519 0.3931 MIEFTSKTCSDPLKQLNEFFSFVKGSLQLDASVFQLEKKIRRLKKKFINNVEKGKKHKPHEHRLFELSKNIWASEVAEKEDSNSNSATSSQISKPETNVVFNEMIRFINNGSMLNENVIRGRLELVGESKREELEVGWSALLAKKLELFAKRARLIKDQTRLMLEAHKSSNH 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2077g00015 172 PANTHER BNAANNG10740D PROTEIN-RELATED 1 166 IPR007592 GO:0006355
Gabi2077g00015 172 Pfam Protein of unknown function, DUF573 1 72 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2077g00015 Gabi-Chr2077 99304 99822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2077g00015 1 169 GeBP Transcription Factor Family AT4G25210 28.638 6.74e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gabi2077g00015 DUF573 8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2077g00015 - - lja:Lj0g3v0291669.1 117.472