Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2077g00014 ATGGGAGAAATACAAAGAGAGCCAATGTCAGTGAGGAACAAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGCGCAAGTTCAAATTTGGAAGTACATATTTGGGTTTGTTGAATTGGCAGTAATGAAATGTGCCATTGAGCTTGGCATAGCTGATGCTATCGAAAGCCATGGAGTCCCCATGACACTTTCAGAGTTATCATCAACTCTAGGGTGTGATCCTTCCCTTCTTAACCGCATCATGAGGTTCCTAATGCAAAGGAAGATATTTAAAGCCATACCCACCAGCCATGGCTTCTCGGGCTATGCTCAAACACCGCTTTCTCGCCGTTTGATGAGAAACGGTGAACATAGCATGGCTTCTTTACTTCTTCTGGAGAGTAGTCCCGTAATGCTAGCACCTTGGCATAGTCTGAGTGCTCGTGTTTTGGCTAATGGCAATCCTTCATTTCAAAGCACTCACGGTGAAGACGTTTGGCGCTATGCTTCGGCAAATCTTGATCATAGCAACCTCATCAATGAAGCCATGGCTTGTGATGCTAAGTTGGTTGTGCCTGCCATCATTCAAGGTTGCAGCGATGCATTTGATGAACTCAGCACATTGGTGGATGTTGGTGGCGGAAACGGCGCCACCTTGCGCCTCATCCTTAAGGCTTTACCATGGATTCGAGGAATCAACTTTGATCTTCCCCATGTCATCGATGTTGCCCCAAAGTGTGATGGGGTGGAACATGTAGCAGGTGACATGTTTCGAAGTGTTCCCAAAGCGGATGCTGTTTTTCTCAAGTGGGTTTTGCATGATTGGGGTGACGAAGAGTGCATCCAAATATTGAAAAAGTGTAGGGAAGCAATTCAAAAGGAAAATGGAAGGGTTATAATTGTGGAGGCAGTGATCGAAGAAGGAGGGAAGCAAGACAGGTTAAAGGATGTAGGATTGATGATGGACATGGTGATGATGGCGCATACTAACTTTGGCAAAGAGCGCACCCTGAAAGAGTGGCAATATGTCATCAAAATGGCTGGATTCACCTCATATATTGTGAAACCCATAAATGCTGTGCAGTCCGTCATTATTGCTCGCTCTTAA 1083 0.4552 MGEIQREPMSVRNKEEEEEEEEEAQVQIWKYIFGFVELAVMKCAIELGIADAIESHGVPMTLSELSSTLGCDPSLLNRIMRFLMQRKIFKAIPTSHGFSGYAQTPLSRRLMRNGEHSMASLLLLESSPVMLAPWHSLSARVLANGNPSFQSTHGEDVWRYASANLDHSNLINEAMACDAKLVVPAIIQGCSDAFDELSTLVDVGGGNGATLRLILKALPWIRGINFDLPHVIDVAPKCDGVEHVAGDMFRSVPKADAVFLKWVLHDWGDEECIQILKKCREAIQKENGRVIIVEAVIEEGGKQDRLKDVGLMMDMVMMAHTNFGKERTLKEWQYVIKMAGFTSYIVKPINAVQSVIIARS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2077g00014 360 SUPERFAMILY "Winged helix" DNA-binding domain 18 114 IPR036390 -
Gabi2077g00014 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 360 IPR016461 GO:0008168
Gabi2077g00014 360 Pfam O-methyltransferase domain 134 341 IPR001077 GO:0008171
Gabi2077g00014 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 358 IPR029063 -
Gabi2077g00014 360 Pfam Dimerisation domain 40 83 IPR012967 GO:0046983
Gabi2077g00014 360 Gene3D Vaccinia Virus protein VP39 112 359 IPR029063 -
Gabi2077g00014 360 Gene3D - 9 110 IPR036388 -
Gabi2077g00014 360 CDD AdoMet_MTases 199 293 - -
Gabi2077g00014 360 FunFam O-methyltransferase family protein 12 110 - -
Gabi2077g00014 360 FunFam O-methyltransferase family protein 112 359 - -
Gabi2077g00014 360 PIRSF O-mtase 6 359 IPR016461 GO:0008168
Gabi2077g00014 360 PANTHER O-METHYLTRANSFERASE 38 341 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2077g00014 Gabi-Chr2077 80805 82162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2077g00014 8 341 Monolignol Biosynthesis Gene Families AT1G77520 35.411 2.04e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2077g00014 K22588 - gmx:100782951 538.11