Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2077g00012 ATGGATTGGAATTCACATGGGAACCTGCATGAGCAGATTTCTCAGCTTATGCAATGCAAGCCCTTGTCCGAGCCAGAGGTAAGGGTCTTGTGTGACAAGGAAAAGGAGATTTTGATGGAAGAGAGCAATGTCCAGCCCGTGAAAAGTCCTGTTACAATTTGTGGTGATATTCACGGACAATTTTATGATCTTGCAGAGCTTTTTCGCATTGGAGGGAAGCTTTTGGTTGCCCTTAAAGTGCGTTATCCTCTGCGTATTACTATTCTAAGAGGAAATCATGAAAGCCGTCAGATTACCCAAGTTTATGGGTTTTATGATGAGTGCCTACGGAAGTATGGTAACGCTAATGTTTGGAAGATCTTTACTGATTTGTTTGATTACTTCCCATTGACGGCATTGTTTGAGCCAGCTCCCAGGAGGGGAGAACCAGATGTAACCAGGAGAACACCTGATTACTTCCTATGA 465 0.4344 MDWNSHGNLHEQISQLMQCKPLSEPEVRVLCDKEKEILMEESNVQPVKSPVTICGDIHGQFYDLAELFRIGGKLLVALKVRYPLRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALFEPAPRRGEPDVTRRTPDYFL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2077g00012 154 Pfam Calcineurin-like phosphoesterase 75 135 IPR004843 GO:0016787
Gabi2077g00012 154 SUPERFAMILY Metallo-dependent phosphatases 8 135 IPR029052 -
Gabi2077g00012 154 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 8 73 IPR047129 GO:0004722
Gabi2077g00012 154 SMART pp2a_7 22 154 IPR006186 GO:0016787
Gabi2077g00012 154 Gene3D - 1 73 IPR029052 -
Gabi2077g00012 154 Gene3D - 74 140 IPR029052 -
Gabi2077g00012 154 ProSitePatterns Serine/threonine specific protein phosphatases signature. 89 94 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2077g00012 Gabi-Chr2077 63419 66725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2077g00012 14 135 Calmodulin-binding Proteins AT5G63870 30.519 4.09e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2077g00012 K04382 - tcc:18589621 245.358