Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2072g00007 ATGGAGAGATTTTTTCAGTTAATGGAGGATTTGTCACCCTTAATTTTGCAGAGAATATGGAAGTATAGCAACTATTCATTGCTTGACTTCTCATCAGTTTCTAAATGCAATGCTTCAACACTGAGGTCTGGAGGATGTGGCAAAGCAATCAAAATTGGAGTCCTAGTTGGAGGGATCACAGTTGGAGCTTCCCTGGTGGCTGCTCTGTCTCTTCTATGTTACTTTGCCAAGCATCGTTCCATTTTTCTGAGAAAACAAATGACAGTTAAGCGCCTGTTACGAGAAGCTGCAGGAAACTCTAGTATTCCTTTCTACCCCTACAAAGAAATAGAGAGAGCCACAAATTTTTTCTCAGAGAAACAAAGGCTGGGAACCGGGGCTTTTGGAACAGTTTATGCTGGAAACCTTCACAATGATGAGTGCGTTGCTATAAAAAAGATCAAGTATAGAGACACCAACAGTGTTGACCAAGTCATGAATGAGATCAAGCTCCTCTCTTCAGTGAGTCACCCAAATTTAGTGCGCCTCCTTGGTTGCTGCATAGAAGGGGGAGAGCAGATACTTGTTTATGAGTATATGCCCAATGGAACACTATCTCAACATTTGCAGAGAGAGAGGGGTGGAGTACTCCCATGGACAGTAAGACTCACCATTGCTACTGAAACTGCTAATGCTATAGCATATCTCCATTCTGCAATTGATCCTCCAATTTATCACAGAGACATAAAATCTAGTAATATACTCTTGGACTATAGCTTTCAATCAAAAGTTGCAGATTTTGGGCTTTCTAGGCTTGGCATGACAGAAACATCACATATCTCAACCGCCCCACAAGGGACTCCGGGTTATGTTGATCCCCAATACCACCAGAACTTCCATCTTTCTGATAAAAGCGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACAGCCATGAAAGTGGTTGATTTTGCTCGAGCTCAGAGTGAGATAAATTTGGCTGCACTTGCTGTTGATAGGATTAGGAGGGGTTGTGTAGATGAGATCATAGATCCCTTCCTTGAACCACATAGGGATGCTTGGACACTCTATTCTGTTCACAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACTATGATTGAAGTGGCAGAGGAGCTAGAACACATCAGACGCAGTGGTTGGGCAACTATGGAGGAAACTGTATGCACGGCTTCATCGGTTGGGTCCGCGTGTTCATCACTTCGTAATGGAAGTGAGAATTCACTGGGTGGTATAAATTTTGAGAGAGCAGGACAAGGGAGTGAGACATTGATTGTTCAACAGAATACTGATAATTTTTTGCAATCAATGGAGGAGGTGAAGGAAGGCTCTCCTGCATCTGTGCATGATACTTGGTTAAGTGGACCTAGCTCACCTTCAACAAACAGTTTGTTGGGAAATGTAGTTCGGTGA 1461 0.4292 MERFFQLMEDLSPLILQRIWKYSNYSLLDFSSVSKCNASTLRSGGCGKAIKIGVLVGGITVGASLVAALSLLCYFAKHRSIFLRKQMTVKRLLREAAGNSSIPFYPYKEIERATNFFSEKQRLGTGAFGTVYAGNLHNDECVAIKKIKYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEYMPNGTLSQHLQRERGGVLPWTVRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARAQSEINLAALAVDRIRRGCVDEIIDPFLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMIEVAEELEHIRRSGWATMEETVCTASSVGSACSSLRNGSENSLGGINFERAGQGSETLIVQQNTDNFLQSMEEVKEGSPASVHDTWLSGPSSPSTNSLLGNVVR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2072g00007 486 MobiDBLite consensus disorder prediction 460 486 - -
Gabi2072g00007 486 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 44 469 IPR044652 GO:0004672
Gabi2072g00007 486 FunFam Wall-associated receptor kinase-like 20 193 402 - -
Gabi2072g00007 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Gabi2072g00007 486 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Gabi2072g00007 486 SMART serkin_6 117 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2072g00007 486 SUPERFAMILY Protein kinase-like (PK-like) 98 390 IPR011009 -
Gabi2072g00007 486 MobiDBLite consensus disorder prediction 466 486 - -
Gabi2072g00007 486 Gene3D Transferase(Phosphotransferase) domain 1 193 410 - -
Gabi2072g00007 486 FunFam Wall-associated receptor kinase-like 14 84 192 - -
Gabi2072g00007 486 Pfam Protein kinase domain 117 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2072g00007 486 ProSiteProfiles Protein kinase domain profile. 117 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2072g00007 486 Gene3D Phosphorylase Kinase; domain 1 78 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2072g00007 Gabi-Chr2072 178169 181128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2072g00007 54 486 Receptor kinase-like Gene Family AT2G23450 67.436 0.0 581
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gabi2072g00007 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2072g00007 - - gmx:100810861 796.964