Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi206g00002 ATGGATCGAGAATGGGGTTCGAAGCCAGGGAGCGGTGGTGCTGCGACGGCGCAGAACGAAGCCATCGACCGTCGAGAGCGTCTCCGGCGACTTGCTTTGGAAACAATCGATCTCGCAAAAGATCCCTATTTCATGCGAAATCACCTTGGGAGCTATGAATGCAAACTGTGTCTCACTCTTCACAACAACGAGGGTAACTACTTGGCACACACACAGGGAAAACGACACCAAACCAATTTGGCAAAGCGTGCTGCTCGCGAGGCCAAAGACGCACCCGCTCAACCCCAACCTCACAAGCGCAAAGTCTCCCTTCGAAAAACAGTTAAGATTGGTCGCCCTGGCTACCGTGTCACTAAGCAATATGATCCTGACACTAAGCAACGATCTCTCCTCTTCCAGATTGAATATCCTGAGATTGAAGACCTCTCGAAGCCAAGACACCGATTCATGTCTTCCTACGAGCAGAGAGTGCAACCATTTGATAAAAGATATCAATATCTTTTGTTTGCAGCTGAACCATATGAAATAGTTGCTTTCAAGGTACCTAGCACAGAGATTGATAAGTCCACTCCAAAGTTTTTCTCGCACTGGGACCCAGACTCAAAGATGTTCACGCTGCAGTTGTATTTTAAAACTAAGCCACCAGAGGCAAACAAACCACAGCCTGCCTCTACAGCCAATGGCACAGCAGCACCTGGTGTTCCACCAAGGCCTATGCCCCCACCATCCCAAGCTCCACCACCACCACCTCCTCCTCCGCAAGGGCTACCTCCTGGTGCACCTCCTCCAATGCCAGGATCATTGCCGCCTCCACCTCCTATGTCAGCAAATGGTCCTAGACCTGCACCTCCTGGTGGAATGCCATCTCTCCCACCCCCACCACCTGTTGGCAGCGGCTCAACGGCTGGTTTCAATATGGGTACGAGGCCTCCATCAATGCCACCTCCACAAGGTTTTCCACCCCAACAAATGCAAAGCCAGGGTATGCGTATGCCTCCTCCACCCCCTAACATGGGACAGTAG 1023 0.5181 MDREWGSKPGSGGAATAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKDAPAQPQPHKRKVSLRKTVKIGRPGYRVTKQYDPDTKQRSLLFQIEYPEIEDLSKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASTANGTAAPGVPPRPMPPPSQAPPPPPPPPQGLPPGAPPPMPGSLPPPPPMSANGPRPAPPGGMPSLPPPPPVGSGSTAGFNMGTRPPSMPPPQGFPPQQMQSQGMRMPPPPPNMGQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi206g00002 340 FunFam Splicing factor 3a subunit 2 94 218 - -
Gabi206g00002 340 Pfam Zinc-finger of C2H2 type 52 76 - -
Gabi206g00002 340 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Gabi206g00002 340 MobiDBLite consensus disorder prediction 233 298 - -
Gabi206g00002 340 MobiDBLite consensus disorder prediction 213 340 - -
Gabi206g00002 340 Gene3D Classic Zinc Finger 46 89 - -
Gabi206g00002 340 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 338 - -
Gabi206g00002 340 SMART CactinC_cactus_3 89 217 - -
Gabi206g00002 340 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Gabi206g00002 340 Gene3D - 94 218 - -
Gabi206g00002 340 MobiDBLite consensus disorder prediction 1 21 - -
Gabi206g00002 340 SUPERFAMILY beta-beta-alpha zinc fingers 48 82 IPR036236 -
Gabi206g00002 340 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Gabi206g00002 340 MobiDBLite consensus disorder prediction 309 340 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi206g00002 1 228 C2H2 Transcription Factor Family AT2G32600 88.596 4.25e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi206g00002 K12826 - gmx:100818114 460.685