Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2068g00020 ATGAAGAAACAAGGGTGTGAGATTGAGGCAATAGGCATCAACTACAAGATCCACACACAGACAACAAAGCAACCTTTTAAAATCTTCAGCAAATCTCCACAACTGAATAGCCTAGATGGTCTTCAGGAACCAGCAGATGAAGCAAAAGCTAAACAAAGACCATGCAATGGAGTTAGGCATGTCCTCAAGGATGTGAACTGCTTAGCCAAGCCATGGGAAATTCTGGCAATTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTTGAGATTCTTGCTGGTAAAGTTAATCCACAAAGTGGGTCCATCTTGGTGAACCAGAATCCTGTAGATAAAGCTCAGTTCAGGAAGGTTTCAGGGTATGTTACACAAAAGGATACCCTTTTTCCCTTACTTACAGTTGAAGAAACCATGATGTTTAGTGCAAAGCTAAGGTTAAATCTTCCTCAAGAACAACTATGCTCCAAGGTTAAGTCACTGATTCAGGAGCTTGGCCTTAGCCATGTTGCTAGGTCTCGAGTTGGAGATGAAAGGGTACGAGGAATATCTGGTGGCGAAAGGCGCAGAGTTTCCATTGGTGTTGAAGTCATACATGATCCAAATGTGCTGATTCTGGATGAACCAACTTCAGGACTTGACAGTACCTCAGCTCTTCAAATAATTGATATGCTTAAAGTCATGGCTGAATCTAGAGGAAGAACTATAATCCTAAGTGTACATCAACCCGGGTTCAGAATAGTGAAGTTGTTCAACTCAATACTGTTGTTAGCCAATGGCTATGGGTTACACCATGGCACTGTGGATTTGCTGGGTGTGAATCTAAGGTTAATGGGTTTAGAACTTCCTCTTCATGTTAATGTAGTTGAGTTTGCCATTGAATCCATTGAGACCATTCAGCAACAACCGAAATGTCAGCAAGTGCATATAGAAGTGCCACGACAATTACCATGGCCAATGCAACAAAAGAAAGGTGATGGTCATCAAGGTGAGAGTAGAAGTGGTAAGTTTACTCTGCAACAGCTTTTTCAACAATCCAAGGTAATTGACATAGAAATCATCAATGCGGGAATGGATTTCACTTGTGATTTTGCTAATTCTAGATTAAGAGAAACTATGATTCTCACTCATAGGTTCTCCAAAAACATCCTTCGTACAAAGGAGCTCTTTGCATGTAGGACAATTCAGATGCTGATTTCTGGGCTGGTTTTAGGCTCAGTCTTTTGTAATCTCAAGGATGGTCTAGAGGGAGCAGAAGAAAGGGTGGGTCTATTTGCTTTTATATTAACGTTTTTGATATCAAGCACCGTTGAAGCTCTACCAATTTTTCTGCAAGAGAGAGAGATTCTAATGAAGGAGACCTCTAGTGGAAGCTACAGAGTTTCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTCACAATGCCTTTATACTGGCTTATTGGTCTCAACAGGAATCTCACGGCATTTTTGCACTTCTTGTTGCTAATTTGGTTAATTCTTTATACAGCAAATTCGGTTGTGGTATGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCAGTGATAGCTGGTGTCATCGGTTCATCTTTCTTGTTCTCTGGCTACTTCATATCAAATCATGAAATTCCGAATTACTGGATTTTCATGCATTATATATCTATATTTAAGTATCCCTTTGAAGGGTTCATGATAAATGAGTTCTCCAACTCAAAGAAGTGCTTGGAGTACATGTTTGGGGCATGTGTGATGAGGGGAGAGGATGTGCTTAAACAACAAGGGTATGGAGGGGAGAGTAGCAGATGGAAGAATGTTGGGGTGATGGTATGCTTCATCTTCGTTTACAGGTTCATTTCTTATGTAATTCTTAGGTACAGATGCTCGAAAAATGTCATCCTCTGA 1935 0.4067 MKKQGCEIEAIGINYKIHTQTTKQPFKIFSKSPQLNSLDGLQEPADEAKAKQRPCNGVRHVLKDVNCLAKPWEILAIVGPSGAGKSSLLEILAGKVNPQSGSILVNQNPVDKAQFRKVSGYVTQKDTLFPLLTVEETMMFSAKLRLNLPQEQLCSKVKSLIQELGLSHVARSRVGDERVRGISGGERRRVSIGVEVIHDPNVLILDEPTSGLDSTSALQIIDMLKVMAESRGRTIILSVHQPGFRIVKLFNSILLLANGYGLHHGTVDLLGVNLRLMGLELPLHVNVVEFAIESIETIQQQPKCQQVHIEVPRQLPWPMQQKKGDGHQGESRSGKFTLQQLFQQSKVIDIEIINAGMDFTCDFANSRLRETMILTHRFSKNILRTKELFACRTIQMLISGLVLGSVFCNLKDGLEGAEERVGLFAFILTFLISSTVEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFTMPLYWLIGLNRNLTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSSFLFSGYFISNHEIPNYWIFMHYISIFKYPFEGFMINEFSNSKKCLEYMFGACVMRGEDVLKQQGYGGESSRWKNVGVMVCFIFVYRFISYVILRYRCSKNVIL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2068g00020 644 Gene3D - 49 309 IPR027417 -
Gabi2068g00020 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 268 IPR027417 -
Gabi2068g00020 644 Pfam ABC-2 type transporter 371 579 IPR013525 GO:0016020|GO:0140359
Gabi2068g00020 644 ProSitePatterns ABC transporters family signature. 182 196 IPR017871 GO:0005524|GO:0016887
Gabi2068g00020 644 FunFam ABC transporter G family member 5 47 307 - -
Gabi2068g00020 644 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 13 629 - -
Gabi2068g00020 644 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 283 IPR003439 GO:0005524
Gabi2068g00020 644 SMART AAA_5 71 259 IPR003593 GO:0016887
Gabi2068g00020 644 Pfam ABC transporter 62 210 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2068g00020 Gabi-Chr2068 208519 210789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2068g00020 67 312 Calmodulin-binding Proteins AT2G36910 24.903 4.62e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2068g00020 K05681 - gmx:121172640 1074.31