Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2068g00019 | ATGGCAGATGAAAGCGTCAACCTTCCTCCTGGATTTCTCTTCTCTCCAACAGATGAAGAACTTGTTCTTCACTTTCTCTATTGTAAGGCTTCTCTTCTACCATACAATCCAAACATCATCCCCGATCTTGATCTGTCTCTGCATGTTCCTTGGGAATTAAATGGGAAGGCGTTGGCAAGTGGAAATCAATACTATTTCTTCACCAAAGTGAATGAAAACAGAGCCAGCACAGAAAATGGGTATTGGAAGGAAATAGGTGTCACGGAACCTATATTGTCAACCATTGACAAGAAAGTGGGAATCAAGAAGTACCTAATATTCCACATTGGCGAAGCTCCACAAGGTACTCAAACCAATTGGGTGATGCAAGAATATCATATTTGCTCCAATGAGTTTGACACTGCAACATATGATCAAAGTTGGAGCAAGTGGGTTTTATGCAGAGTGTATGAAAAGAACTGGTCTCAACAAGGTGTAAACTTCTCTAGTGATGACGATGACAGTGGAACGGAGCTTTCTTTGCTTGATGAAGTTTATTTGTCGTTGGATGATGATCTGGAAGAAATAAGCATGCCTAATTAG | 582 | 0.4055 | MADESVNLPPGFLFSPTDEELVLHFLYCKASLLPYNPNIIPDLDLSLHVPWELNGKALASGNQYYFFTKVNENRASTENGYWKEIGVTEPILSTIDKKVGIKKYLIFHIGEAPQGTQTNWVMQEYHICSNEFDTATYDQSWSKWVLCRVYEKNWSQQGVNFSSDDDDSGTELSLLDEVYLSLDDDLEEISMPN | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2068g00019 | 193 | ProSiteProfiles | NAC domain profile. | 8 | 152 | IPR003441 | GO:0003677|GO:0006355 | |
Gabi2068g00019 | 193 | Gene3D | NAC domain | 17 | 156 | IPR036093 | GO:0003677|GO:0006355 | |
Gabi2068g00019 | 193 | SUPERFAMILY | NAC domain | 4 | 152 | IPR036093 | GO:0003677|GO:0006355 | |
Gabi2068g00019 | 193 | PANTHER | NAC TRANSCRIPTION FACTOR 56 | 8 | 159 | - | - | |
Gabi2068g00019 | 193 | Pfam | No apical meristem (NAM) protein | 9 | 127 | IPR003441 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2068g00019 | Gabi-Chr2068 | 178137 | 180431 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2068g00019 | 1 | 157 | NAC Transcription Factor Family | AT1G61110 | 40.556 | 1.05e-38 | 133 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Gabi2068g00019 | NAM | 2.5e-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2068g00019 | - | - | gmx:100170711 | 322.398 |