Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2068g00005 ATGGGATCTCAAGGGGGGACAATACAAGAGCCAAAAAATGCACCTTTGGCTAGGGAAGGGTCCTTGTATAATCTGACCCTTGATGAGGTGCAGAACCAGCTTGGAAATTTGGGGAAACCACTTGGAAGCATGAATCTGGATGAGCTTCTCAAGAGTGTGTGGAGTGTTGATGCTAGTGATGCCTCAGGATTGGATTTTGGTGGTGATGCTAACATGCAACATGGTCAAGTTGCTTCTGGGTCCTCTTTGAATCCACAAGGGAGCTTAACTTTGTGTGGGGATCTTAGCAAGAAAACTGTTGATGAGGTTTGGAGAGATATGCAACTGAAGAAGAGTACTAATATGGATAGGAAAGTCCATGAGAGACAACCTACACTGGGTGAGATGACCTTGGAGGATTTCTTGGTGAAGGCTGGAGTGGCTGCTGAATCTTTTCCTACCAAGGATGGTGCTATGGAAGTGGTTGATTCAAATGGGGCTTCCCAACAAAATGTTTCACAACATGGTCATTGGATGCAATACCAGCTCCCTTCAGTGCAGCAGCCTCTACAACAGCATCAGCATCAAAATCAGCAAAAAAATTTGATGGGGGGTTTTGTGGCTGGTCATGCCATTCAACAGCCTTTCCAGGTTGCGGTGAGTCCAATTTTGGATGCAACATACTCTGAAGCAATGGTGACAATGTCACCATCTTCTTTAATAGGTACATTATCAGATACACAAACTCCAGGTCGGAAAAGGGTTGCCTCTGGTAATGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGCGGATGATTAAGAATAGGGAATCTGCTGCTCGGTCACGAGCAAGAAAACAGGCTTATACACAAGAACTGGAAATTAAAGTTTCGCATTTAGAAGAGGAGAACGAAAGGCTGAGAAAACAGAATCAATTGGCTCTAGTTTAG 930 0.4462 MGSQGGTIQEPKNAPLAREGSLYNLTLDEVQNQLGNLGKPLGSMNLDELLKSVWSVDASDASGLDFGGDANMQHGQVASGSSLNPQGSLTLCGDLSKKTVDEVWRDMQLKKSTNMDRKVHERQPTLGEMTLEDFLVKAGVAAESFPTKDGAMEVVDSNGASQQNVSQHGHWMQYQLPSVQQPLQQHQHQNQQKNLMGGFVAGHAIQQPFQVAVSPILDATYSEAMVTMSPSSLIGTLSDTQTPGRKRVASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSHLEEENERLRKQNQLALV 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2068g00005 309 SUPERFAMILY Leucine zipper domain 260 306 IPR046347 GO:0003700|GO:0006355
Gabi2068g00005 309 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Gabi2068g00005 309 Pfam bZIP transcription factor 260 305 IPR004827 GO:0003700|GO:0006355
Gabi2068g00005 309 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 303 IPR004827 GO:0003700|GO:0006355
Gabi2068g00005 309 Gene3D - 258 308 - -
Gabi2068g00005 309 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 258 309 - -
Gabi2068g00005 309 SMART brlzneu 256 308 IPR004827 GO:0003700|GO:0006355
Gabi2068g00005 309 Coils Coil 283 309 - -
Gabi2068g00005 309 CDD bZIP_plant_BZIP46 260 303 - -
Gabi2068g00005 309 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 303 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2068g00005 Gabi-Chr2068 39498 42782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2068g00005 1 306 bZIP Transcription Factor Family AT3G56850 55.627 3.11e-96 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2068g00005 bZIP_1 1.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2068g00005 K14432 - gmx:100170741 412.92