Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2064g00002 ATGGCGGATATCCCGAATGAATTGGCAAAGAAGGGTTTGGAGAAATTGATGGACCGGGCAATTGGAGAAGCACGATATATATGTTGCTTCACATCCATTGCTGCAGACTGTGAAAAGGAAAAAGGAAATTTGGAAGCAAAAGTGAAGGCTGTGGGGCAACATGTTGATCAGCTCAGAAGAAGCGCACAAGATACTCCAGCTGATGTTACTTCTTGCCAAGAGCGAGCTGGTGAGCTCATTCAAGAAGACACTAGAACAAAAAATACATGCTTCTTTGGATGGTGTCCAAATTGCATATGGCGATATAGTAGGGGAAAGGAACTGGCCAATAAGACGGAGGATATTAGAAGAATCATGCAAGAAATTGAAACCTTGAATATTACAGGACTCGCTCCTCATCTTCCGGGCATTGAGTATCATTCTTCCCAAGATTACGTCTCTTTTAAAAGCAGAGAGTTGAAATACAAAGAACTTTTGGATGCACTGACAGATGACAACAACTATATAATAGGATTGCAAGGGATGGGTGGCAGTGGCAAGACAACATTGGCATTAAAAGTGGGTCAGGAACTCAAGCAATCAAAACAATTTGATCTTGTCATCGATACTACAGTGTCATCTACTCCTGCCATAAGAAAGATTCAAGATGATATTGCTGTACCCTTGGGATTAGCATCAGAATTGAAGGATAAGGCTGAATCAGAGCGACCCAAATTACTACAGAGCAGATTAACCAAAGGTGAGAAAATTCTTCTAATATTGGATGATGTATGGGAAAATACTGTGGAGCATATCAATTTTGAAACAATAGGGATTCCAAAAAGAGGTTGCAAAGTTCTTCTAACCACACGTCATCTAAGGGCATGTCGCTCATTGGAATGTGACAAAATAATTGAACTGCAGCTCTTACCAGAGGATGAGGCATGGACCCTGTTCGAAAAGCATGCTTGTATAAACAATAATACATCTAAAGGTTTGGTGAACATGGGACATGAAATTGTCAAAGAATGCAAAGGGTTACCAGTTGCAGTTGCTATTATTGCTAGCCGTTTAAAGGGCGAACAACGCCAGGAACAGTGGAATGCAGCCTTAATATCCTTGCAAAAGCCCATGTACGGTGTTAGTAAAGATTTGAATGAAATCTATAAATATATCTACTTTCTCCAGCTGCCAAAGTTAATCGGCATTTGCTCTGAAAACTATCGCCCAACGTTCCTCCCACTTTTGACGGACTTTACACTCAGTGAATGTTCACACTTTAACATTAAATCTATTGGTGATTTGTCCATTCTTGATTCAAGAGAATTGGGTAGCACAACTATCAAGGACTTGAGTGGGGACGTGCAATATTTTCTGAGTATGGAAAATCCCAAGGTGAATGACTCGAAAGAAATAAGTGAACAACAAATGCACTTATTACGGTTTGCAAAACTTCAGTTGGGTGATCTGTCTCAGATGACATATATTTTTGTGGGTCCCAAGAATTCTGGTACCCTCCAAAACCTTGAAGAGTTGGCAATTGCGCGATGTGAACAATTGGAAGTAATCTTTTCTGCTTCTATGTTAAGATGCCTACCACAATTGCTGAAACTAATGATAACAGAATGCAAAGAATTAAAGCATATCATTGAAGAGGATAAGGAGAATGAGAGATGTTCAAATTTTCCCTCTGGAAAGACATGCTTCCCAAAGCTAGCATTGCTTGTGGTAAATAAATGCAATAAGTTGAAATGTGTCTTCCATGTCTCCACATCTAAAGAGTTTCCCAAGCTAGAGAGTGTGATAATAAAAGAAGCGTATGAGCTAGAGGAAGTATTCAAATGTGAACAGAAAATTGAGCTTCCAAATCTGGAAATTGCAATACTTGTCAAACTACCAAGCCTCTGCCGGGGAATTGAGTTTCAGACTGCAAAAAGGCTTTTCATGCAGAAATGTGCAAAACTCTCTTTGACTTCAACGGCTGTTACGGCTGTTACCAAACAGTCTGTTACCAAATAG 1998 0.3984 MADIPNELAKKGLEKLMDRAIGEARYICCFTSIAADCEKEKGNLEAKVKAVGQHVDQLRRSAQDTPADVTSCQERAGELIQEDTRTKNTCFFGWCPNCIWRYSRGKELANKTEDIRRIMQEIETLNITGLAPHLPGIEYHSSQDYVSFKSRELKYKELLDALTDDNNYIIGLQGMGGSGKTTLALKVGQELKQSKQFDLVIDTTVSSTPAIRKIQDDIAVPLGLASELKDKAESERPKLLQSRLTKGEKILLILDDVWENTVEHINFETIGIPKRGCKVLLTTRHLRACRSLECDKIIELQLLPEDEAWTLFEKHACINNNTSKGLVNMGHEIVKECKGLPVAVAIIASRLKGEQRQEQWNAALISLQKPMYGVSKDLNEIYKYIYFLQLPKLIGICSENYRPTFLPLLTDFTLSECSHFNIKSIGDLSILDSRELGSTTIKDLSGDVQYFLSMENPKVNDSKEISEQQMHLLRFAKLQLGDLSQMTYIFVGPKNSGTLQNLEELAIARCEQLEVIFSASMLRCLPQLLKLMITECKELKHIIEEDKENERCSNFPSGKTCFPKLALLVVNKCNKLKCVFHVSTSKEFPKLESVIIKEAYELEEVFKCEQKIELPNLEIAILVKLPSLCRGIEFQTAKRLFMQKCAKLSLTSTAVTAVTKQSVTK 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2064g00002 665 FunFam Probable disease resistance protein At1g61300 137 297 - -
Gabi2064g00002 665 PRINTS Disease resistance protein signature 169 184 - -
Gabi2064g00002 665 PRINTS Disease resistance protein signature 497 513 - -
Gabi2064g00002 665 PRINTS Disease resistance protein signature 337 351 - -
Gabi2064g00002 665 PRINTS Disease resistance protein signature 244 258 - -
Gabi2064g00002 665 SUPERFAMILY RNI-like 474 618 - -
Gabi2064g00002 665 CDD SIMIBI 169 203 - -
Gabi2064g00002 665 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 399 616 - -
Gabi2064g00002 665 Coils Coil 108 128 - -
Gabi2064g00002 665 Gene3D Ribonuclease Inhibitor 387 664 IPR032675 -
Gabi2064g00002 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 384 IPR027417 -
Gabi2064g00002 665 Gene3D - 138 299 IPR027417 -
Gabi2064g00002 665 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Gabi2064g00002 665 Gene3D - 303 386 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2064g00002 Gabi-Chr2064 9829 14326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2064g00002 170 369 WRKY Transcription Factor Family AT5G45050 28.571 7.13e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2064g00002 - - aprc:113851230 442.965