Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2058g00010 ATGGCGAAGGGTGACGACGCTGTGAGAAGGAAGAAGAACAAAGCTATTTGCAAAAAGCTTAGAAGCAAGAATGACTCTTCCTCTGTCTCTGCAAAGGTAGCCGCACTTATCGCCGCCAAGAAGCGCCGCAAGGCCGGAAAACGCCGCATGTGCCAGGGGATGTGCTTTAGTCTACCTACTCCAGATGATCCATTCAATGATCAATATGGAAAAAAAGAATTCAAAACAATAGTTCCTAAAAAGAAAAAAATTTCTCCAAAAGATGAGATGATTCCTCTTAATGGGAAGAGTGCACCTGAAAGGAAAGGAACAGTTGGTGGGAATGTTTCACAGAAATTGAATCATTTACAAAGGGAAAATGAGTATGTCACAGCCACCAATAATCTGGGTCAGAAATGTATTATTAACTCAGAAAGGAAAAATATTAAGGGGACTGAGATACCTGATCTTTGTGGTGCCCAACAGAATGATTGTGAAATTTCAGAGTTCCCTTCTAAGTTTGTTTATTGGTGTCTAAGTTCAATTGAAAATGCATTGCGTCATGGTGATGCCTACACTGATGGAGAGGGCAACTCTTTCTTTCTTAACTCATGGGGATTAGAATTTTCAAAGTGTTATTCTACTGGGAAAGATCTGATGGAGACCAGTGGATCTTCTGCTACTACTGTGCAAATTGCATGGATGGTTTCTGGTGCAGCTGATACTTTTGTGAGAAAAGAGAAACAAGGCTTATCCTTTGTCAGTCCCTTTCTTTTGTTCCTTGTACCTTCCCAAGAAAAAGCTGTCCAGGTTCGAACAGTTTGCAAGCCTTTAAAATCTCTAGGAATACATACAGTGAGTATCCATCCAGGTGCTTCCTTAGATCATCAGATTGAAGGTCTGAAAAGTTGTGAGCCTGAGTTTCTTGTTTCTACTCCTGAGAGGCTTTTGGAGCTTGTTTCCATGAAGGCCGTTGATATTTCTGGTGTCTCTGTGCTGGTTATTGATGGGCTGAATACTATTTGCAGTGCTGGTCACACTGATACAATAAAATTGATCAAGAGTTTCATTTCTGGCAACCCTCGTCTTGTGGTTTTCAATGATTGCTTCAATCATGCATCTATACCAATGGTTCAGTATCTTCTGCCAGGATCAATTTGTAGACTCTCTCTCAATAAGTCAATTACCAGCCTAAGCTCATGCATTGTCCAGTCAGTTCAAGTGTGTACATCAGAAGAAGATAAACTTGTTGAGAGCATCGAAGCCGTAGATCAATTCTGGACCAGACATACTCGTAATTCAAATCTGCTATATATTTTAAGGAAAGACATCAAGTGCCATACATTGGTCAGGACTCTCAAATCCAAGGTTTCTTCCATTTTACTTGATTCTGATGCAGCAAGTGTTCATGATAGTGGGGATTCAAACAGCAGATCAAAAGCAGGGGTTTCCATGATTGATTTGGAGGATATCTTTACTACGGATATAGGAACGTATGATGTAGTAGTCCTACCTAGTTTTGTACCCTCTATGGACACTTATGTGCATATTTTGACAAAGATGGCTCGCCATAGTGTCAATGGGGTATTGCACTCTTTCTTAACAAAAAGAGATGCAGAACTTGCTGGACCGCTAATTGCAATACTTGAACAATGTGGGCAGGAAGTTGCTCAGACCCTGCAAGATCTGCACCATACATCGAACATGTTGGAAGATTGA 1698 0.4081 MAKGDDAVRRKKNKAICKKLRSKNDSSSVSAKVAALIAAKKRRKAGKRRMCQGMCFSLPTPDDPFNDQYGKKEFKTIVPKKKKISPKDEMIPLNGKSAPERKGTVGGNVSQKLNHLQRENEYVTATNNLGQKCIINSERKNIKGTEIPDLCGAQQNDCEISEFPSKFVYWCLSSIENALRHGDAYTDGEGNSFFLNSWGLEFSKCYSTGKDLMETSGSSATTVQIAWMVSGAADTFVRKEKQGLSFVSPFLLFLVPSQEKAVQVRTVCKPLKSLGIHTVSIHPGASLDHQIEGLKSCEPEFLVSTPERLLELVSMKAVDISGVSVLVIDGLNTICSAGHTDTIKLIKSFISGNPRLVVFNDCFNHASIPMVQYLLPGSICRLSLNKSITSLSSCIVQSVQVCTSEEDKLVESIEAVDQFWTRHTRNSNLLYILRKDIKCHTLVRTLKSKVSSILLDSDAASVHDSGDSNSRSKAGVSMIDLEDIFTTDIGTYDVVVLPSFVPSMDTYVHILTKMARHSVNGVLHSFLTKRDAELAGPLIAILEQCGQEVAQTLQDLHHTSNMLED 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2058g00010 565 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 7 545 - -
Gabi2058g00010 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 246 359 IPR027417 -
Gabi2058g00010 565 Gene3D - 241 389 IPR027417 -
Gabi2058g00010 565 MobiDBLite consensus disorder prediction 87 107 - -
Gabi2058g00010 565 MobiDBLite consensus disorder prediction 1 27 - -
Gabi2058g00010 565 Pfam DEAD/DEAH box helicase 243 350 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2058g00010 Gabi-Chr2058 193857 209953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2058g00010 223 556 Eukaryotic Initiation Factors Gene Family AT1G72730 20.809 8.07e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2058g00010 - - gmx:100809099 828.55