Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2053g00006 | ATGGTTGAAAATATGAAGAGAAGCAACTTTGAAGTGTTGGGATTGTGTTGTGCTACAGAAGCGGAACTGGTTGAAAGAATTTTGAAGCCTCTTCATGGAGTAAAAGACATCTCTGTGATAGTCCCTACCAAAACAGTCCATGTGGTCCATGATGTTCTCTTAATTTCTGAGTCACAAATAACTGATACACTGAATATGGCAAGACTTGAAGCTAGTTTGAAGCCACAGGGAGAGGCCAACAATGAAAAAAAATGGCCAGACTTATCTACTATAGCGTGTGGCTTGTTACTAGCACTTTCTTTCTTGAAGTATATATATCCCCCTTTGGGATGGTTGGCTCTTGGTTCTGTTGCCATTGGCTTCCCTAGAGTTCTATTCAGGACCATAGCTTCCATTAGGGCTCTTACTCTTAATATCAACATTCTGGTTCTATTGTCAGTGTGTGGTACTGTTGCTATACAAGATTTTTGGGAGGCTGGAGTCATCATCTTCATGTTCTCCATTGCTCAATGGCTTGAGACATTGGCAACTCACAAGGCAACGGTTGCAATGTCCTCTTTAACTAGCATGGTTCCTCAAAAGGCTGTTGTTGCTGAGACCGGGGAACGTGTTGATGTCAGTGATGTTGAGATCAACACCATCCTAGCGATCAAGGCTGGAGATTCTATTCCTCTTGATGGAGTCGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTAACAGGAGAATCATTCCCTGTTACCAAAGAGTTAGATTCAATAGTCTGGGCTGGAACTATTAATCTGAATGGATATATAAGTGTAAAAGCTACAGTGTTGGCAAATGACACAGTGGTGGCAAGAATGTCAAAACTTGTTGAAGAGGCTTCTAGCAGAAAATCTCGAACACAAAGATTCATAGATAATTTTTCAAAATACTATCTTCCAGTGGTTGTCTTGATTTCAGCTAGCATTGCTGTGGTTCCAGCTGTATTAGGAGTTCCTGATATTAATCCTTGGTTTCATCTGGCAATTGTGGTTTTATTGAGTGCATGCCCTTGTGCTCTCATCCTCTCCACACCTGTTACAATCTTTTGTGCTCTAACAAAAGCTGCAATAAGTGGATTATTACTGAAAGGTGGAGATTATATTGAAACACTATCTGGAATTAAGACAGTTGCTTTTGATAAAACGGGCACAATAACAAGAGGAGAGTTCTCTGTGACAGATTTTTCTGTTGTTGCAGATGACATTAGCATAGAAGCCTTATTGTACTGGGTTTCAAGCATTGAGAGTAAATCAAGTCATCCTATGGCAGCTGCACTAGTGGAATATGGAATGTTGCATTCTATCAAACCCATCCCTGAAAATGTGGAGAATTTTCAAAATTTTCCGGGGGAAGGAATTTTTGGTGCAATTGATGGGAAGGATATATATGTAGGCAATACGAGAATTGGTGTCAGAGCAGGCTGCGAAAGAGTTGATTGTAATGTGCAATTAGTAAGTCAAGAAATTTCAACCCCGAGGGGATCAACTCTGGTTGGAGTCTTCAGCCTGGTTGATACTTGCAGATCAGGTGCTTTGGATGCAATAGAAGAGCTAAAGTCATTAGGTGTGAGATCAGCCATGCTAACAGGAGATAGCACTCAAGCTGCTAAGTATGTTGAGAGTCAGTTGAACCATGCTCTAGACATTGTTCATGCAGAACTTCTACCCGAGGAAAAGGCAGTGATTATTGAGAGTTTCAAGAAAGATGGACTAACAGCCATGGTTGGAGATGGCATGAATGATGCTCCTGCATTAGCTACAGCTGACATTGGTATCTCAATGGGAATATCTGGTTCAGCTCTAGCAAATGAGTCAGGCAATGCAATTCTCATGTCAAATGACATCCGAAAAATACCTGAAGCCATTAAGCTAGCTAGAAAAACTACAAGAAAGCTCATTGAGAATGTCATTATTTCAGTTGTCTCCAAGAGTGCCATACTGGTATTGGCAATTGCAGGATATCCAATAGTTTGGCTTGCTGTGTTGGCTGATGTAGGGACCTGTTTACTTGTGATTCTCAATAGCATGTTGATTTTACAAGAGAAACCAAAGTATGAAAGAGAATCTACAAAGTCTAAATATGGCACCTTCTTGGAAGATAAGACCATAACTCTACTTGACAAGCAAAGTAATAATGATGAGGAGAGCCAAGGGCTTCTTACTGTGGAAAAGTGTGGTAAAGAGTGCTGTAAAAATGTCACTCCTCATTTGGCAACTACAAATGCAACCAAACATGAATCTTCTGAACCTCCAAAGTATAGCTTACTCAAGGGAAACAACCATGGGAACTTTGTCTTGGTTGAGGTTCATATAGGGAAACCTTCCAATGGTTGCGGTGTTGACAATATCGGTAGCCTTAGCCAGCCAGAAATTATTATTGAGTGA | 2415 | 0.4066 | MVENMKRSNFEVLGLCCATEAELVERILKPLHGVKDISVIVPTKTVHVVHDVLLISESQITDTLNMARLEASLKPQGEANNEKKWPDLSTIACGLLLALSFLKYIYPPLGWLALGSVAIGFPRVLFRTIASIRALTLNINILVLLSVCGTVAIQDFWEAGVIIFMFSIAQWLETLATHKATVAMSSLTSMVPQKAVVAETGERVDVSDVEINTILAIKAGDSIPLDGVVVEGKCEVDEKMLTGESFPVTKELDSIVWAGTINLNGYISVKATVLANDTVVARMSKLVEEASSRKSRTQRFIDNFSKYYLPVVVLISASIAVVPAVLGVPDINPWFHLAIVVLLSACPCALILSTPVTIFCALTKAAISGLLLKGGDYIETLSGIKTVAFDKTGTITRGEFSVTDFSVVADDISIEALLYWVSSIESKSSHPMAAALVEYGMLHSIKPIPENVENFQNFPGEGIFGAIDGKDIYVGNTRIGVRAGCERVDCNVQLVSQEISTPRGSTLVGVFSLVDTCRSGALDAIEELKSLGVRSAMLTGDSTQAAKYVESQLNHALDIVHAELLPEEKAVIIESFKKDGLTAMVGDGMNDAPALATADIGISMGISGSALANESGNAILMSNDIRKIPEAIKLARKTTRKLIENVIISVVSKSAILVLAIAGYPIVWLAVLADVGTCLLVILNSMLILQEKPKYERESTKSKYGTFLEDKTITLLDKQSNNDEESQGLLTVEKCGKECCKNVTPHLATTNATKHESSEPPKYSLLKGNNHGNFVLVEVHIGKPSNGCGVDNIGSLSQPEIIIE | 804 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2053g00006 | 804 | FunFam | Putative cadmium/zinc-transporting ATPase 3 | 399 | 517 | - | - | |
Gabi2053g00006 | 804 | Pfam | E1-E2 ATPase | 191 | 366 | - | - | |
Gabi2053g00006 | 804 | SFLD | Haloacid Dehalogenase | 371 | 638 | - | - | |
Gabi2053g00006 | 804 | Pfam | haloacid dehalogenase-like hydrolase | 384 | 599 | - | - | |
Gabi2053g00006 | 804 | Gene3D | - | 177 | 291 | - | - | |
Gabi2053g00006 | 804 | NCBIfam | HAD-IC family P-type ATPase | 161 | 410 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Gabi2053g00006 | 804 | NCBIfam | HAD-IC family P-type ATPase | 505 | 667 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Gabi2053g00006 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 609 | 621 | - | - | |
Gabi2053g00006 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 585 | 604 | - | - | |
Gabi2053g00006 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 237 | 251 | - | - | |
Gabi2053g00006 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 531 | 541 | - | - | |
Gabi2053g00006 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 388 | 402 | - | - | |
Gabi2053g00006 | 804 | PRINTS | P-type cation-transporting ATPase superfamily signature | 509 | 520 | - | - | |
Gabi2053g00006 | 804 | PANTHER | CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED | 3 | 692 | - | - | |
Gabi2053g00006 | 804 | Gene3D | - | 1 | 74 | - | - | |
Gabi2053g00006 | 804 | SUPERFAMILY | Calcium ATPase, transduction domain A | 202 | 287 | IPR008250 | - | |
Gabi2053g00006 | 804 | ProSiteProfiles | Heavy-metal-associated domain profile. | 6 | 72 | IPR006121 | GO:0046872 | |
Gabi2053g00006 | 804 | SUPERFAMILY | HAD-like | 386 | 686 | IPR036412 | - | |
Gabi2053g00006 | 804 | CDD | P-type_ATPase_HM | 94 | 687 | - | - | |
Gabi2053g00006 | 804 | SUPERFAMILY | HMA, heavy metal-associated domain | 3 | 76 | IPR036163 | GO:0046872 | |
Gabi2053g00006 | 804 | FunFam | Putative cadmium/zinc-transporting ATPase 3 | 2 | 74 | - | - | |
Gabi2053g00006 | 804 | NCBIfam | cadmium family heavy metal-translocating P-type ATPase | 139 | 689 | - | - | |
Gabi2053g00006 | 804 | SFLD | p-type atpase | 371 | 638 | IPR044492 | - | |
Gabi2053g00006 | 804 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 139 | 640 | IPR023298 | - | |
Gabi2053g00006 | 804 | Gene3D | - | 379 | 636 | IPR023214 | - | |
Gabi2053g00006 | 804 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 390 | 396 | IPR018303 | - | |
Gabi2053g00006 | 804 | Gene3D | - | 399 | 517 | IPR023299 | GO:0000166 | |
Gabi2053g00006 | 804 | FunFam | Copper-transporting ATPase 1, putative | 177 | 291 | - | - | |
Gabi2053g00006 | 804 | NCBIfam | heavy metal translocating P-type ATPase | 139 | 687 | IPR027256 | GO:0006812|GO:0016020|GO:0019829 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2053g00006 | Gabi-Chr2053 | 39792 | 45048 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2053g00006 | 3 | 752 | Primary Pumps ATPases | AT4G30110 | 56.505 | 0.0 | 853 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2053g00006 | K01534 | - | gmx:100815324 | 1269.6 |