Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00039 ATGTCGGGGCAAACACAGCGTCTGAATGTGGTCCCCACAGTGACGATGCTGGGAGTGGTGAAAGCTCGTTTGGTTGGAGCTACTCGAGGCCACGCGCTTCTGAAGAAGAAGAGTGATGCTCTCACCGTGCAGTTCAGGCAGATCCTGAAGAAGATTGTGTCCACAAAGGAATCAATGGGTGACATAATGAAGACCTCTTCTTTCGCCTTAACTGAGGCCAAGTATGTTGCCGGGGACAACATCAAGCATGTTGTGCTTGAGAATGTTCGAGAAGCTTCACTCCGGGTCCGTTCTCGCCACGAGAATATTGCCGGAGTGAGACTTCCAAAATTCGACTACACCGCCGATGGCGAGGTCACAAAGAATGACCTCACCGGATTGGCCAGGGGTGGCCAGCAGGTGCAGCAATGCCGTGCTGCTTACGTCAAGGCTATTGAGGTTCTTGTTGAGCTTGCTTCCTTGCAGACCTCTTTCCTCACCCTTGATGAGGCTATCAAGACCACCAACCGCAGGGTCAATGCTCTTGAGAATGTTGTCAAGCCTAGGTTGGAGAATACCATTAGTTACATTAAGGGTGAGTTGGATGAGCTTGAAAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAGGGATATAAGAAGAGAGAAATTGAGAAGCAGATGCAGATGCAGATGCAGTCTGCCAAGGAACAGCTTGTTGAAAAGCTCCCCTATCGCCAAGGGCTTTCCTTCAATTCCTCTCAAAACATGTTGTCCGTGGCATCTGAGAAAGATGAGGATATCATTTTCTGA 789 0.4892 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLRVRSRHENIAGVRLPKFDYTADGEVTKNDLTGLARGGQQVQQCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMQMQMQSAKEQLVEKLPYRQGLSFNSSQNMLSVASEKDEDIIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00039 262 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
Gabi2043g00039 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
Gabi2043g00039 262 FunFam V-type proton ATPase subunit D 1 199 - -
Gabi2043g00039 262 Coils Coil 180 200 - -
Gabi2043g00039 262 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Gabi2043g00039 262 Gene3D - 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00039 Gabi-Chr2043 280895 282439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00039 1 262 Primary Pumps ATPases(2) AT3G58730 78.626 1.14e-152 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00039 K02149 - gmx:100808847 440.654