Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00037 ATGGATCCACAACCACAACCACAAGATGATGAACAAATCACACTCCCGAGAAACATCATCTTCGACAAGTACGAGATGGGGCGGGTTCTGGGTCAGGGGAACTTCGCCAAGGTCTACTACGGAAGAAACTTAATCACCAACGAGAGCGTGGCCATAAAGGTGATAAAGAAAGATAAGCTAAAAAAAGAGAGGCTCGTGAAGCAGATCAAGCGAGAGGTCTCTGTGATGAGGCTTGTGAGACACCCTAACATAGTTGAATTGAAGGAAGTTATGGCCACAAAGGGAAAGATCTTCTTGGTCATGGAATACGTCAAAGGTGGTGAACTCTTCTCCAAAGTCGCAAAGGGAAAGCTTAAAGAAGACGTGGCAAGGAAATACTTTCAACAACTCATAAGCGCCGTTGACTTTTGCCATAGCCGTGGCGTCACACACCGTGACCTCAAGCCTGAGAATCTTCTATTGGATGAAAACGAAGACCTTAAAGTCTCTGACTTTGGTTTATCAGCTTTGCCGGAGCAACGCCGTGCCGATGGGATGCTCGTGACGCCGTGCGGTACACCTGCTTATGTTGCACCCGAGGTGTTGAAGAAAAAAGGGTATGATGGTTCGAAAGCTGATATATGGTCATGTGGTGTTATTCTCTATGCTTTGCTCTGTGGTTATCTTCCTTTTCAAGGTGAGAATGTGATGAGGATTTATAGGAAGGCTTTCAAGGCTGAATATGAATTCCCAGATTGGATTTCAATGGAAGCTAAGAACTTGATCTCTAATTTGCTCGTTGCTGATCCTGAAAAGAGGTTTTCTATCCCTGAAATCATGCAGGATCCTTGGTTCCAAATTGGGTTCTTGAGACCCATTGCGTTTTCAATGAAGGAGTCTTCGGTTGAAGAGGACAACATTGATTTCAACGAGGTTGGTGGTGATGAAGAACATGTTCCTGAATTGGTTGGTGCAATGGCAAAGCCTTCTCGTCCCTTTTACAATGCCTTTGAGATCATTTCCTCTTTGTCACATGGCTTTGATCTTAGGAACTTGTTTGAGACCAACAAGAGGTCCCCTTCTATGTTCATATCAAAGTTCTCTGCTTCGGCTGTGTTGGCAAAGCTTGAGGCGGTGGCGAAGAAGCTGAATTTTAGGATCACGGGCAAGAAAGAGTTCACGGTTAGGATGCAGGGGAATAGAGAGGGGAGAAAGGGGAAACTGGCCATGACGGTGGAGGTTTTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTAATAAGTCTGCCGGAGACACACTGGAGTACATTAAGTTCTGTGAGGAACAAGTTAGACCTTCCCTCCAAGACATAGTTTGGAGCTGGCAGGGTGACAGTAATTCTCATCAGTAG 1371 0.4595 MDPQPQPQDDEQITLPRNIIFDKYEMGRVLGQGNFAKVYYGRNLITNESVAIKVIKKDKLKKERLVKQIKREVSVMRLVRHPNIVELKEVMATKGKIFLVMEYVKGGELFSKVAKGKLKEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRADGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLCGYLPFQGENVMRIYRKAFKAEYEFPDWISMEAKNLISNLLVADPEKRFSIPEIMQDPWFQIGFLRPIAFSMKESSVEEDNIDFNEVGGDEEHVPELVGAMAKPSRPFYNAFEIISSLSHGFDLRNLFETNKRSPSMFISKFSASAVLAKLEAVAKKLNFRITGKKEFTVRMQGNREGRKGKLAMTVEVFEVAPEVAVVEFNKSAGDTLEYIKFCEEQVRPSLQDIVWSWQGDSNSHQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00037 456 ProSitePatterns Protein kinases ATP-binding region signature. 30 57 IPR017441 GO:0005524
Gabi2043g00037 456 Pfam Protein kinase domain 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2043g00037 456 SMART serkin_6 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2043g00037 456 Gene3D Transferase(Phosphotransferase) domain 1 17 326 - -
Gabi2043g00037 456 CDD CIPK_C 328 442 - -
Gabi2043g00037 456 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 441 - -
Gabi2043g00037 456 ProSiteProfiles NAF domain profile. 322 347 IPR018451 GO:0007165
Gabi2043g00037 456 FunFam Non-specific serine/threonine protein kinase 322 446 - -
Gabi2043g00037 456 ProSiteProfiles Protein kinase domain profile. 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2043g00037 456 Gene3D Kinase associated domain 1, KA1 327 447 - -
Gabi2043g00037 456 FunFam Non-specific serine/threonine protein kinase 17 315 - -
Gabi2043g00037 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Gabi2043g00037 456 SUPERFAMILY Protein kinase-like (PK-like) 20 279 IPR011009 -
Gabi2043g00037 456 Pfam NAF domain 326 381 IPR004041 GO:0007165
Gabi2043g00037 456 FunFam Non-specific serine/threonine protein kinase 16 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00037 Gabi-Chr2043 263470 265494 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00037 4 456 CBL-interacting serine-threonine protein kinases AT5G25110 62.031 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi2043g00037 Pkinase 9.7e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00037 - - lja:Lj3g3v2118210.1 730.324