Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00036 ATGGCAGCCAATCTTGGGGTTGTCACTGGAAAGCACTTAGCAGAGCATTGTAGAAATGAATATTCTCGGGGGCCCAACTTTATCCTTTGGTTTATTGCTGAAATTGCCATAGTGGCCGCTGACATTCCTGAAGTAATTGGTACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGATTGGTGTTATTCTGACAGGATTCAGCACATTGATCCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTTGAATTTGTTATTGCATTTCTAGTATTTACAATTGCTGCTTGCTTTATGGTTGAGCTTGGATATGCAAAGCCTGATGCGAGAGAAGTTACGAAGGGTCTTTTTGTTCCAGATCTTAAAGGGAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGGGCTATGGTTATGCCGCACAATCTCTTCCTCCACTCAGCACTGGTGCTTTCTAGAAAAATACCACGATCAGTTCGTGGAGTCAAAGACGCTTGCAGATTTTACATGATAGAAAGTGCCATTGCTCTTACGGTGGCCTTCCTCATAAATATTTCTATTATCTCCGTAAGTGGTGCAGTTTGCAATTCTTCAAACTTGAGTATAGAAGATCAGATGAACTGTCAGAATTTGGATTTGAACAAGGCCTCCTTTCTACTAAGAAATGTCTTGGGCAAATGGAGTTCAAAACTATTTGGAATTGCTTTGCTCGCGTCAGGCCAAAGTTCCACTATAACAGGAACATATGCAGGGCAGTATGTCATGCAGGGTTTTCTTCATTTACGACTGAAGCCATGGATTCGAAATCTGTTAACTCGTTGCTTTGCCATAGTTCCTAGTTTGACTGTTGCACTCATTGGTGGCTCTTCTGGAGCTGGGAAGCTCATAATAATTGCATCAATGATCTTATCATTTGAGCTTCCTTTTGCTTTGGTTCCTCTCCTCAAGTTCACTAGCAGCAAAACCAAGATGGGAACACATGTCAACTCGATCATGATTTCGGCTGTTACTTGGATCATTGGTTTCCTCCTCATGGCCATAAATATATACTATTTATTAGATAGCTTCGTCAATTTGCTTCTTCATAGCCACTTAAAATTTGTTGCTAAGGTGTTTCTCGGGATAATAGGATTTTCGGGTGTGGCAGTATATTTGGCTGGTATTGTATATCTAGTGTTTCGCAAAAATAGAAAGGCTACACACCTTTTGTCACTTACTACACCGGAAGAAGATCAACAAATGGCAAATGAACAAGGCAATGGATCAATGTATTGTCTCCCAAGAGAAGACATAGTAAGCATGCAACTGCCACAAAGAAGTAGTCCAGCAGCAGAACTTGAATGA 1350 0.4104 MAANLGVVTGKHLAEHCRNEYSRGPNFILWFIAEIAIVAADIPEVIGTAFALNMLFNIPVWIGVILTGFSTLILLALQQYGVRKLEFVIAFLVFTIAACFMVELGYAKPDAREVTKGLFVPDLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGVKDACRFYMIESAIALTVAFLINISIISVSGAVCNSSNLSIEDQMNCQNLDLNKASFLLRNVLGKWSSKLFGIALLASGQSSTITGTYAGQYVMQGFLHLRLKPWIRNLLTRCFAIVPSLTVALIGGSSGAGKLIIIASMILSFELPFALVPLLKFTSSKTKMGTHVNSIMISAVTWIIGFLLMAINIYYLLDSFVNLLLHSHLKFVAKVFLGIIGFSGVAVYLAGIVYLVFRKNRKATHLLSLTTPEEDQQMANEQGNGSMYCLPREDIVSMQLPQRSSPAAELE 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00036 449 Pfam Natural resistance-associated macrophage protein 1 332 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 Hamap Divalent metal cation transporter MntH [mntH]. 1 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 PRINTS Natural resistance-associated macrophage protein signature 29 55 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 PRINTS Natural resistance-associated macrophage protein signature 57 76 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 PRINTS Natural resistance-associated macrophage protein signature 132 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 PRINTS Natural resistance-associated macrophage protein signature 270 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 PRINTS Natural resistance-associated macrophage protein signature 242 261 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 PRINTS Natural resistance-associated macrophage protein signature 302 321 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 PRINTS Natural resistance-associated macrophage protein signature 82 103 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 1 402 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 2 326 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00036 449 NCBIfam Nramp family divalent metal transporter 3 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00036 Gabi-Chr2043 241418 247955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00036 1 449 Inorganic Solute Cotransporters AT1G15960 75.610 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00036 K21398 - gmx:100808501 761.14