Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00034 ATGGCTACAACCGATTCAACTTCTGAGCAACCGCAATTCATTGTGAGCAACGGTAACGGGAGCTTTTCGAATTCGCCGCTGATTGAAAACTCGGATACTAATCAAATTATTGTCCCTGATAATAGAAGCTGGAAAAACTTTTTTACATACATGGGGCCTGGGTTTCTTGTTTCCATTGCATATATAGACCCAGGAAACTTTGAGACAGATCTTCAATCAGGGGCACAATATAAATATGAGTTACTTTGGATCATTTTGGTGGCGTCATGTGCTGCTCTTATAATTCAATCAATGGCAGCCAATCTTGGGGTTGTCACTGGAAAGCACTTAGCAGAGCATTGTAGAAATGAATATTCTCGGGGGCCCAACTTTATCCTTTGGTTTATTGCTGAAATTGCCATAGTGGCCGCTGACATTCCTGAAGTAATTGGTACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGATTGGTGTTATTCTGACAGGATTCAGCACATTGATCCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTTGAATTTGTTATTGCATTTCTAGTATTTACAATTGCTGCTTGCTTTATGGTTGAGCTTGGATATGCAAAGCCTGATGCGAGAGAAGTTACGAAGGGTCTTTTTGTTCCAGATCTTAAAGGGAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGGGCTATGGTTATGCCGCACAATCTCTTCCTCCACTCAGCACTGGTGCTTTCTAGAAAAATACCACGATCAGTTCGTGGAGTCAAAGACGCTTGCAGATTTTACATGATAGAAAGTGCCATTGCTCTTACGGTGGCCTTCCTCATAAATATTTCTATTATCTCCGTAAGTGGTGCAGTTTGCAATTCTTCAAACTTGAGTATAGAAGATCAGATGAACTGTCAGAATTTGGATTTGAACAAGGCCTCCTTTCTACTAAGAAATGTCTTGGGCAAATGGAGTTCAAAACTATTTGGAATTGCTTTGCTCGCGTCAGGCCAAAGTTCCACTATAACAGGAACATATGCAGGGCAGTATGTCATGCAGGGTTTTCTTCATTTACGACTGAAGCCATGGATTCGAAATCTGTTAACTCGTTGCTTTGCCATAGTTCCTAGTTTGACTGTTGCACTCATTGGTGGCTCTTCTGGAGCTGGGAAGCTCATAATAATTGCATCAATGATCTTATCATTTGAGCTTCCTTTTGCTTTGGTTCCTCTCCTCAAGTTCACTAGCAGCAAAACCAAGATGGGAACACATGTCAACTCGATCATGATTTCGGCTGTTACTTGGATCATTGGTTTCCTCCTCATGGCCATAAATATATACTATTTATTAGATAGCTTCGTCAATTTGCTTCTTCATAGCCACTTAAAATTTGTTGCTAAGGTGTTTCTCGGGATAATAGGATTTTCGGGTGTGGCAGTATATTTGGCTGGTATTGTATATCTAGTGTTTCGCAAAAATAGAAAGGCTACACACCTTTTGTCACTTACTACACCGGAAGAAGATCAACAAATGGCAAATGAACAAGGCAATGGATCAATGTATTGTCTCCCAAGAGAAGACATAGTAAGCATGCAACTGCCACAAAGAAGTAGTCCAGCAGCAGAACTTGAATGA 1641 0.4083 MATTDSTSEQPQFIVSNGNGSFSNSPLIENSDTNQIIVPDNRSWKNFFTYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSMAANLGVVTGKHLAEHCRNEYSRGPNFILWFIAEIAIVAADIPEVIGTAFALNMLFNIPVWIGVILTGFSTLILLALQQYGVRKLEFVIAFLVFTIAACFMVELGYAKPDAREVTKGLFVPDLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGVKDACRFYMIESAIALTVAFLINISIISVSGAVCNSSNLSIEDQMNCQNLDLNKASFLLRNVLGKWSSKLFGIALLASGQSSTITGTYAGQYVMQGFLHLRLKPWIRNLLTRCFAIVPSLTVALIGGSSGAGKLIIIASMILSFELPFALVPLLKFTSSKTKMGTHVNSIMISAVTWIIGFLLMAINIYYLLDSFVNLLLHSHLKFVAKVFLGIIGFSGVAVYLAGIVYLVFRKNRKATHLLSLTTPEEDQQMANEQGNGSMYCLPREDIVSMQLPQRSSPAAELE 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00034 546 Hamap Divalent metal cation transporter MntH [mntH]. 39 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 NCBIfam Nramp family divalent metal transporter 52 420 - -
Gabi2043g00034 546 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 32 499 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00034 546 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00034 Gabi-Chr2043 241418 248422 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00034 16 545 Inorganic Solute Cotransporters AT1G15960 77.256 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00034 K21398 - gmx:100808501 927.546