Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00033 ATGCCTGCTGACACTTCTTCAGTTTCTGACCAAACCGTGTGTGTCACTGGCGCTGGTGGGTTCATAGCTTCTTGGCTCGTCAAAGCTCTCTTAGAGAAAGGCTACACTGTCAAAGGAACCGTGAGAAACCCAGATGATCCGAAGAATGGTCACTTGAAAGAGTTGGTAGGAGCAAGGGAGAGGCTAACTCTGCATAAAGTTGATCTTCTTGATGTTGAGTCTATTAAAGATGTTGTTAATGGTTGTCATGGTGTCTTCCACACGGCCTCACCTGTCACTGATAACCCCGAAGAAATGTTGGAGCCAGCAGTGAATGGAGCCAAGAATGTGATAAAAGCAGCTGCAGAAGCAAAAGTGAGACGCGTGGTGTTCACTTCATCAATTGGCACAGTGTATATGGACCCCAATAGGAGTAGGGATGTGGTGGTTGATGAGTCATGCTGGAGTGATTTGGAGTACTGCAAGACCACCAAGAACTGGTATTGTTATGGGAAGACCGTGGCTGAACAAGAAGCATGGGATTTAGCAAAAGAGAAAGAGGTGGACTTGGTTGTGATGAACCCAGTTTTGGTTCTAGGACCATTGCTACAACCTACCATTAATGCTAGTACAATTCACATCCTCAAGTACCTTACTGGCTCTGCTAAGACTTTTGTAAATGCAACTCAGTCTTATGTAGATGTTAGGGATGCAGCATTAGCTCACATTCTTGTTTACGAGACACCTTCTGCTTCTGGTCGATACATATGTTCTGAAAGTTCTTTGCATCGTGGTGAGCTAGTTGAAATTCTAGCCAAGTACTTCCCCGAGTACCCTATTCCTACCAAATGTTCAGATGAAAAGAACCCAAGAGTGAAACCCTATGTGTTTTCAAATAAAAAGCTTAAAGATTTGGGATTGGAATTCACCCCAGTGAAGCAGTGTCTCTATGAGACCGTCAAGAGTCTACAAGAGAAAGGACACCTTCCTGTCCCCACAAAGCAAGAAGACTAA 993 0.4431 MPADTSSVSDQTVCVTGAGGFIASWLVKALLEKGYTVKGTVRNPDDPKNGHLKELVGARERLTLHKVDLLDVESIKDVVNGCHGVFHTASPVTDNPEEMLEPAVNGAKNVIKAAAEAKVRRVVFTSSIGTVYMDPNRSRDVVVDESCWSDLEYCKTTKNWYCYGKTVAEQEAWDLAKEKEVDLVVMNPVLVLGPLLQPTINASTIHILKYLTGSAKTFVNATQSYVDVRDAALAHILVYETPSASGRYICSESSLHRGELVEILAKYFPEYPIPTKCSDEKNPRVKPYVFSNKKLKDLGLEFTPVKQCLYETVKSLQEKGHLPVPTKQED 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00033 330 CDD FR_SDR_e 13 300 - -
Gabi2043g00033 330 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 317 IPR036291 -
Gabi2043g00033 330 Pfam NAD dependent epimerase/dehydratase family 13 244 IPR001509 -
Gabi2043g00033 330 Gene3D - 3 330 - -
Gabi2043g00033 330 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 11 313 - -
Gabi2043g00033 330 FunFam Cinnamoyl-CoA reductase 1 4 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00033 Gabi-Chr2043 233060 236259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00033 8 276 Monolignol Biosynthesis Gene Families AT1G80820 73.606 1.32e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00033 K09753 - gmx:100799994 592.808