Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi2043g00022 | ATGTCTTCTACGAGATCAGGTCCAACAGTGGGTAGTTGTAGAGTTGCAGGAGATAATCGAGCCACATTCCAACCGCTTCCCAATCCTACAACAAATTTGCAAGGGGATGAGATCAAGCCACTATCAGGAAAACCATACTATCATGTGGTTCTTTCCAAAACACATCTTAGTACCCGTTATGTGATGGGGCCATCAAACAACTTATTCTCAAAACTTCCTTCTCATGCGGTCCCTGCTGTTCTCAACTATCGGGGCAAGAGCTGGGACATGATGTATAATGGACAAAACACACCTCCCAAGAGGTTTACTTCTGATGGCTGGAGAAATTTTGCTGATGATAATTGTTTGAAGGTTGGAGATGCATGCATTTTTGAGCTCATGGAAAACAGTAAAGAGAAAATCATCTTTGAAGTTCAAATTCTTAGAGGTGACATACCATCCAAATTTCTTGAAAATGAAATGATCTTTGGTCAGAATGCAGAAGTGCCAATTGTCATTGACTAG | 504 | 0.4107 | MSSTRSGPTVGSCRVAGDNRATFQPLPNPTTNLQGDEIKPLSGKPYYHVVLSKTHLSTRYVMGPSNNLFSKLPSHAVPAVLNYRGKSWDMMYNGQNTPPKRFTSDGWRNFADDNCLKVGDACIFELMENSKEKIIFEVQILRGDIPSKFLENEMIFGQNAEVPIVID | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi2043g00022 | 167 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Gabi2043g00022 | 167 | SMART | B3_2 | 47 | 144 | IPR003340 | GO:0003677 | |
Gabi2043g00022 | 167 | ProSiteProfiles | B3 DNA-binding domain profile. | 80 | 144 | IPR003340 | GO:0003677 | |
Gabi2043g00022 | 167 | CDD | B3_DNA | 45 | 142 | IPR003340 | GO:0003677 | |
Gabi2043g00022 | 167 | MobiDBLite | consensus disorder prediction | 23 | 37 | - | - | |
Gabi2043g00022 | 167 | SUPERFAMILY | DNA-binding pseudobarrel domain | 43 | 140 | IPR015300 | - | |
Gabi2043g00022 | 167 | Pfam | B3 DNA binding domain | 80 | 136 | IPR003340 | GO:0003677 | |
Gabi2043g00022 | 167 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED | 43 | 146 | IPR044837 | - | |
Gabi2043g00022 | 167 | Gene3D | - | 34 | 144 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi2043g00022 | Gabi-Chr2043 | 181009 | 183658 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi2043g00022 | 50 | 144 | REM Transcription Factor Family | AT4G33280 | 28.421 | 2.54e-06 | 44.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Gabi2043g00022 | B3 | 6e-12 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi2043g00022 | - | - | ccaj:109817502 | 204.142 |