Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00022 ATGTCTTCTACGAGATCAGGTCCAACAGTGGGTAGTTGTAGAGTTGCAGGAGATAATCGAGCCACATTCCAACCGCTTCCCAATCCTACAACAAATTTGCAAGGGGATGAGATCAAGCCACTATCAGGAAAACCATACTATCATGTGGTTCTTTCCAAAACACATCTTAGTACCCGTTATGTGATGGGGCCATCAAACAACTTATTCTCAAAACTTCCTTCTCATGCGGTCCCTGCTGTTCTCAACTATCGGGGCAAGAGCTGGGACATGATGTATAATGGACAAAACACACCTCCCAAGAGGTTTACTTCTGATGGCTGGAGAAATTTTGCTGATGATAATTGTTTGAAGGTTGGAGATGCATGCATTTTTGAGCTCATGGAAAACAGTAAAGAGAAAATCATCTTTGAAGTTCAAATTCTTAGAGGTGACATACCATCCAAATTTCTTGAAAATGAAATGATCTTTGGTCAGAATGCAGAAGTGCCAATTGTCATTGACTAG 504 0.4107 MSSTRSGPTVGSCRVAGDNRATFQPLPNPTTNLQGDEIKPLSGKPYYHVVLSKTHLSTRYVMGPSNNLFSKLPSHAVPAVLNYRGKSWDMMYNGQNTPPKRFTSDGWRNFADDNCLKVGDACIFELMENSKEKIIFEVQILRGDIPSKFLENEMIFGQNAEVPIVID 167
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00022 167 MobiDBLite consensus disorder prediction 1 37 - -
Gabi2043g00022 167 SMART B3_2 47 144 IPR003340 GO:0003677
Gabi2043g00022 167 ProSiteProfiles B3 DNA-binding domain profile. 80 144 IPR003340 GO:0003677
Gabi2043g00022 167 CDD B3_DNA 45 142 IPR003340 GO:0003677
Gabi2043g00022 167 MobiDBLite consensus disorder prediction 23 37 - -
Gabi2043g00022 167 SUPERFAMILY DNA-binding pseudobarrel domain 43 140 IPR015300 -
Gabi2043g00022 167 Pfam B3 DNA binding domain 80 136 IPR003340 GO:0003677
Gabi2043g00022 167 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 43 146 IPR044837 -
Gabi2043g00022 167 Gene3D - 34 144 IPR015300 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi2043g00022 Gabi-Chr2043 181009 183658 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00022 50 144 REM Transcription Factor Family AT4G33280 28.421 2.54e-06 44.7
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gabi2043g00022 B3 6e-12 CL0405
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00022 - - ccaj:109817502 204.142