Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00019 ATGTATAAGATGAAGCTCGGAATGGGAATCATTGTCCTCATTTCGCTCGTGCTGCTGTTGGTGTTGTGCGCCCCATTTTCTTCTTCAAAACCCAATGACCCATTCCTCGGAATCGCTCCCGAAGATGACAAGTATTACAAGTCATCAGATGTAATAAGATGTAAAGATGGATCTGGAAAATTCACCAAAGCTCAGCTCAATGATGATTTCTGTGACTGCCATGATGGCACCGATGAACCTGGTACATCAGCATGTCCGGGTGGAAAATTCTTTTGCAGGAATTTAGGACATGTTTCTGTTTATCTGTTTTCATCTAGAGTGAATGATGGAATTTGCGATTGCTGTGATGGAACTGATGAATATGATGGTAAAGTAAAGTGCCCAAATACCTGCTGGGAGGCTGGGAAAGCTGCTCGAAATAAGCTGATGAAAAAGATTGCTACATATCAAGAGGGTGTCAAATTGCGAAAGCAAGAAGTTGAACAAGCTAAATTAGATCTGGCGAAGGATGAGGCAGAACTTTCAAAATTGAAAAGGGAAGAAAGTATACTTAAAGGAATTGTGGAACAGCTGAAGGAGCATAAAGAACAAATAGAGAAGGAAGAGGAGAAGGAGCGTTTACAGAAGGAAAAAGAAGACAAGCAGAAAAAAGAGTCTGAGGAGAAGGCTAATGAAGGAAAGATTAAAGCTGATGAGGAAGATATGGGGCATAAAAATGAAGCTGGAAAGCATTCAGATGTTGAAGACAATACTGTGGCAAGTAATCATGATAAAATTGGAATTCTGGAAGATTCTCCTGCAGATCAGGATGAAGCAGTGGACAAGTCAGATGATGTACTTGATAATTATGATGGAGCCACTGATAGTCCTGGAAGTGAAGGATCGTTGCTTAACAAAGTGGAAGAGTTGAATAAAAATTTTAATGCAAAAGATGCTGAGGGAGAACCTGCTGTTAAATCTGAAACTGATTTTAAAGTTGGAAAGAAAGAGTCTTCTGATGAAATCACCAATATGGTGAATGATGTATCTGAAAATACTGAGGGGTTATCGAAGGAGGAGTTGGGCCGGCTTGTTGCTTCTCGCTGGACAGGAGAAAATATTGGTAAGCAAAGTGCTGAAGCTGATACCACATTAGACAACGAAAATCAGGAAGATCTTCCAAAGGGGGAAAATAATGAGGAAGATGAAGGCTATGCTTCTGAAACTGATGATGAAAGCCACAAATATGATGAAGATGAAATTGATGACGAATATCGAGAGGACGAGCATGAGGACTTTAGTTCCTCCTACAAATCTGACACTGATAATGAACCAGACTTCTCAGATGGTACCACAACGGATAATCCTTCTATGTTAGAGAGAATACAGAAAACTGTACGGAGCATTTTTAAGGCTGTTAATGTATTCCAGACTCCAGTGAATCAGTCAGATGCTGCTCGTATACGCAAGGAATATGATGAATCAAGTACCAAGTTGTCTAAAATGCAGTCTAGAATATCGAGTCTGACGCAAAAGCTAAAACAGGATTTCGGTCCAGCGAAGGAGTTTTATTCATTCTATGATCGTTGCTTTGAGGGCAAGCAGAACAAGTACACTTACAAAGTCTGCCCCTATAAACAGGCTTCTCAGGAGGAGGGCTATTCCACCACCCGTTTGGGGCGCTGGGACAAATTTGAGGATTCATACAGAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAAGCTAAAATGTGGGTTGAAAAATGAGATTGCAGATGTAGATGAACCAAGCCGTTGCGAATATGTAGCTTTACTATCTACCCCAGCCCTTTGTCATGAGGAAAAGCTGAAGGAGTTACAACACAAGCTAGACTTGTTAAATTCGGAACAACCAGAAAACCATGATGAGTTATGA 1923 0.4067 MYKMKLGMGIIVLISLVLLLVLCAPFSSSKPNDPFLGIAPEDDKYYKSSDVIRCKDGSGKFTKAQLNDDFCDCHDGTDEPGTSACPGGKFFCRNLGHVSVYLFSSRVNDGICDCCDGTDEYDGKVKCPNTCWEAGKAARNKLMKKIATYQEGVKLRKQEVEQAKLDLAKDEAELSKLKREESILKGIVEQLKEHKEQIEKEEEKERLQKEKEDKQKKESEEKANEGKIKADEEDMGHKNEAGKHSDVEDNTVASNHDKIGILEDSPADQDEAVDKSDDVLDNYDGATDSPGSEGSLLNKVEELNKNFNAKDAEGEPAVKSETDFKVGKKESSDEITNMVNDVSENTEGLSKEELGRLVASRWTGENIGKQSAEADTTLDNENQEDLPKGENNEEDEGYASETDDESHKYDEDEIDDEYREDEHEDFSSSYKSDTDNEPDFSDGTTTDNPSMLERIQKTVRSIFKAVNVFQTPVNQSDAARIRKEYDESSTKLSKMQSRISSLTQKLKQDFGPAKEFYSFYDRCFEGKQNKYTYKVCPYKQASQEEGYSTTRLGRWDKFEDSYRVMVFSNGDKCWNGPDRSLKVKLKCGLKNEIADVDEPSRCEYVALLSTPALCHEEKLKELQHKLDLLNSEQPENHDEL 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00019 640 Coils Coil 612 632 - -
Gabi2043g00019 640 Gene3D - 516 614 IPR009011 -
Gabi2043g00019 640 MobiDBLite consensus disorder prediction 261 282 - -
Gabi2043g00019 640 MobiDBLite consensus disorder prediction 307 335 - -
Gabi2043g00019 640 MobiDBLite consensus disorder prediction 381 405 - -
Gabi2043g00019 640 ProSiteProfiles MRH domain profile. 521 616 IPR044865 -
Gabi2043g00019 640 MobiDBLite consensus disorder prediction 423 438 - -
Gabi2043g00019 640 MobiDBLite consensus disorder prediction 307 450 - -
Gabi2043g00019 640 Pfam Glucosidase II beta subunit-like protein 482 638 IPR036607 -
Gabi2043g00019 640 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 15 640 IPR039794 -
Gabi2043g00019 640 SUPERFAMILY Mannose 6-phosphate receptor domain 525 615 IPR009011 -
Gabi2043g00019 640 MobiDBLite consensus disorder prediction 195 295 - -
Gabi2043g00019 640 Coils Coil 153 224 - -
Gabi2043g00019 640 MobiDBLite consensus disorder prediction 406 422 - -
Gabi2043g00019 640 Pfam Glucosidase II beta subunit-like 29 173 IPR028146 -
Gabi2043g00019 640 MobiDBLite consensus disorder prediction 195 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00019 Gabi-Chr2043 146569 156456 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00019 27 640 Calmodulin-binding Proteins AT5G56360 60.000 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00019 K08288 - gmx:100807083 976.852