Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00018 ATGGAAGAAGTTTGTCTGAATAGTGAGCCGCTTTTTGATGAAAACGATGAGTTTGATGTTGAGAGGAACTCTTCTGTAGCAGAACAGGATCCTGAATCTTTAAACTCACAATCAAGGAACTCACCACTTCCAACTGTGGGTTTGGAATTTGATTCCTTTGATGAAGTTTACAACTTTTACAATATCTATGCTAAGGAAGAAGGCTTTGGCATCAGAGTGAGCAATTCATGGTTTAGATCAAAGAGAAAAGAGCGCTATAGAGCAAAACTAAGCTGCAGTAGTGCTGGTTTCAAGAAAAAGAGCAGGGCCAATAATCCAAGAGCAGAAACAAGAACTGGTTGTCCTGCAATGATAGTGATTAGAATGGTTGACTCCAAGAGATGGAGGATAGTGGAAGTTGAGCTTCAACACAACCATCAAGTGAGTCCACAGAGCAAACGGTTCTACAAATCACATAAGAAAATGATCCTTGCTGCCAGAGAATCACAACCGCTGCCAGAGCCTATAGCAGAAGTACACACCATCAAGTTGTATCGAACAACTGTCATGGATGTTGGTTATAATAATGATTACTCAAATTTTGAAGAAAGTCATGACACCAATTTTGATAACTTTAAATATTTGGAACTTGGAGAAGGGGATGCCAATGCTATATATAATTATTTTTGCAGAATGAAGTTGACCTGTCCAAATTTCTTTTACTTGTTTGATATTGATGATGACGGGCATCTAAAAAATGTGTTCTGGGCGGATTCCAGGTCAAGGGTTGCTCATAATTACTTTAATGATACTGTTACTATAGACACAACTTGTTTAGCAAACAAATATGAGATCCCTTTGATATCATTTGTTGGTGTTAACCATCATGGACATTCTGTATTATTGGGCTGTGGCTTCCTTGGACATGAATCAGTGGATTATTTTGTCTGGATATTCAAGGCATGGCTTAAATGTATGCTTGGTCGTCCTCCACATGTTGTTATTACTGACCAGTGCAAGCCCTTGCAAATTGCAGTTGCTCAGGTCTTCCCTCATGCTCGCCATTGTTATTCTTTGCAGTATATTATGCTAAGAGTTCCAGAAAAGTTGGGTGGGTTGCAAGGATATGAAGCTATCAGAAGAAAGCTGTATAATGCTGTCTATGAGTCATTAAAGATAGTTGAGTTTGAAACTTCTTGGACTGATGTGATTAAATGTTATGGACTGGGAGATAACAAGTGGCTTCAGACACTGTATAAAGATAGGCATCTATGGGTTCCGGTTTACCTAAAAGATACTTTTTTTATAGGACTGATCCCAACTAAAGAAAACGAGGGGTTGACTGCATTTTTTGATGGATATGTGCATAAACATACATCCTTTAAGGAATTTCTTGACAAGTATGACCTAGCTCTGCACAGAAAACACTTGAAAGAAGCCATGGCAGATTTGGAGTCTAGAAAATTAAGCTTTGAATTGAATACTAGATGTAATTTTGAGGTGCAGCTTTCAAAGGTGTATACAAAAGAAATCTTTAAAAAGTTTCAGTCTGAGGTTGAAGGCATGTACTCTTGCTTCAACACAAGACAGTTTGTTCAACTACAAAGGATATCTATGTAG 1599 0.3802 MEEVCLNSEPLFDENDEFDVERNSSVAEQDPESLNSQSRNSPLPTVGLEFDSFDEVYNFYNIYAKEEGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSRANNPRAETRTGCPAMIVIRMVDSKRWRIVEVELQHNHQVSPQSKRFYKSHKKMILAARESQPLPEPIAEVHTIKLYRTTVMDVGYNNDYSNFEESHDTNFDNFKYLELGEGDANAIYNYFCRMKLTCPNFFYLFDIDDDGHLKNVFWADSRSRVAHNYFNDTVTIDTTCLANKYEIPLISFVGVNHHGHSVLLGCGFLGHESVDYFVWIFKAWLKCMLGRPPHVVITDQCKPLQIAVAQVFPHARHCYSLQYIMLRVPEKLGGLQGYEAIRRKLYNAVYESLKIVEFETSWTDVIKCYGLGDNKWLQTLYKDRHLWVPVYLKDTFFIGLIPTKENEGLTAFFDGYVHKHTSFKEFLDKYDLALHRKHLKEAMADLESRKLSFELNTRCNFEVQLSKVYTKEIFKKFQSEVEGMYSCFNTRQFVQLQRISM 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00018 532 Coils Coil 467 487 - -
Gabi2043g00018 532 Pfam MULE transposase domain 265 355 IPR018289 -
Gabi2043g00018 532 MobiDBLite consensus disorder prediction 27 41 - -
Gabi2043g00018 532 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 522 IPR031052 GO:0006355
Gabi2043g00018 532 MobiDBLite consensus disorder prediction 1 16 - -
Gabi2043g00018 532 MobiDBLite consensus disorder prediction 1 41 - -
Gabi2043g00018 532 Pfam FAR1 DNA-binding domain 58 142 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00018 Gabi-Chr2043 139418 144202 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2043g00018 MULE 5.1e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00018 K17604 - gmx:100811666 979.163