Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00017 ATGGAAGAAGTTTGTCTGAATAGTGAGCCGCTTTTTGATGAAAACGATGAGTTTGATGTTGAGAGGAACTCTTCTGTAGCAGAACAGGATCCTGAATCTTTAAACTCACAATCAAGGAACTCACCACTTCCAACTGTGGGTTTGGAATTTGATTCCTTTGATGAAGTTTACAACTTTTACAATATCTATGCTAAGGAAGAAGGCTTTGGCATCAGAGTGAGCAATTCATGGTTTAGATCAAAGAGAAAAGAGCGCTATAGAGCAAAACTAAGCTGCAGTAGTGCTGGTTTCAAGAAAAAGAGCAGGGCCAATAATCCAAGAGCAGAAACAAGAACTGGTTGTCCTGCAATGATAGTGATTAGAATGGTTGACTCCAAGAGATGGAGGATAGTGGAAGTTGAGCTTCAACACAACCATCAAGTGAGTCCACAGAGCAAACGGTTCTACAAATCACATAAGAAAATGATCCTTGCTGCCAGAGAATCACAACCGCTGCCAGAGCCTATAGCAGAAGTACACACCATCAAGTTGTATCGAACAACTGTCATGGATGTTGGTTATAATAATGATTACTCAAATTTTGAAGAAAGTCATGACACCAATTTTGATAACTTTAAATATTTGGAACTTGGAGAAGGGGATGCCAATGCTATATATAATTATTTTTGCAGAATGAAGTTGACCTGTCCAAATTTCTTTTACTTGTTTGATATTGATGATGACGGGCATCTAAAAAATGTGTTCTGGGCGGATTCCAGGTCAAGGGTTGCTCATAATTACTTTAATGATACTGTTACTATAGACACAACTTGTTTAGCAAACAAATATGAGATCCCTTTGATATCATTTGTTGGTGTTAACCATCATGGACATTCTGTATTATTGGGCTGTGGCTTCCTTGGACATGAATCAGTGGATTATTTTGTCTGGATATTCAAGGCATGGCTTAAATGTATGCTTGGTCGTCCTCCACATGTTGTTATTACTGACCAGTGCAAGCCCTTGCAAATTGCAGTTGCTCAGGTCTTCCCTCATGCTCGCCATTGTTATTCTTTGCAGTATATTATGCTAAGAGTTCCAGAAAAGTTGGGTGGGTTGCAAGGATATGAAGCTATCAGAAGAAAGCTGTATAATGCTGTCTATGAGTCATTAAAGATAGTTGAGTTTGAAACTTCTTGGACTGATGTGATTAAATGTTATGGACTGGGAGATAACAAGTGGCTTCAGACACTGTATAAAGATAGGCATCTATGGGTTCCGGTTTACCTAAAAGATACTTTTTTTATAGGACTGATCCCAACTAAAGAAAACGAGGGGTTGACTGCATTTTTTGATGGATATGTGCATAAACATACATCCTTTAAGGAATTTCTTGACAAGTATGACCTAGCTCTGCACAGAAAACACTTGAAAGAAGCCATGGCAGATTTGGAGTCTAGAAAATTAAGCTTTGAATTGAATACTAGATGTAATTTTGAGGTGCAGCTTTCAAAGGTGTATACAAAAGAAATCTTTAAAAAGTTTCAGTCTGAGGTTGAAGGCATGTACTCTTGCTTCAACACAAGACAGGTAAATGTTAATGGATCTATAATAACATACATTGTGAAAGAAAGAGTTGAAGTTGAGGGAAATCAGAAGGGAGTTAAAAGTTTTGAAGTTTTATATGAGACTAATGAATTGGATATTCGTTGCATTTGCAGTTTGTTCAACTACAAAGGATATCTATGTAGACATGCACTGAATGTTCTCAATTATAATGGTGTTGAGGAAATCCCATCTCGGTACATCCTGCAACGTTGGATGAGAGATTTCAAGCTAAGGTTTAATCAATACCATGTCTCTGGTAATATTGATACGGACAACCCTGCATCCTTGTATTCTCATCTGTTTAACAATGCTCTTCCAGTATTAGAAGTAGGGGCACAGTCACAGGAGCATTATATGATTGCTTTAAAAGAATTGGAGGAGTTGTTGGACAAGTTTGATATATTGGATAATAACTCATTGTGA 2010 0.3751 MEEVCLNSEPLFDENDEFDVERNSSVAEQDPESLNSQSRNSPLPTVGLEFDSFDEVYNFYNIYAKEEGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSRANNPRAETRTGCPAMIVIRMVDSKRWRIVEVELQHNHQVSPQSKRFYKSHKKMILAARESQPLPEPIAEVHTIKLYRTTVMDVGYNNDYSNFEESHDTNFDNFKYLELGEGDANAIYNYFCRMKLTCPNFFYLFDIDDDGHLKNVFWADSRSRVAHNYFNDTVTIDTTCLANKYEIPLISFVGVNHHGHSVLLGCGFLGHESVDYFVWIFKAWLKCMLGRPPHVVITDQCKPLQIAVAQVFPHARHCYSLQYIMLRVPEKLGGLQGYEAIRRKLYNAVYESLKIVEFETSWTDVIKCYGLGDNKWLQTLYKDRHLWVPVYLKDTFFIGLIPTKENEGLTAFFDGYVHKHTSFKEFLDKYDLALHRKHLKEAMADLESRKLSFELNTRCNFEVQLSKVYTKEIFKKFQSEVEGMYSCFNTRQVNVNGSIITYIVKERVEVEGNQKGVKSFEVLYETNELDIRCICSLFNYKGYLCRHALNVLNYNGVEEIPSRYILQRWMRDFKLRFNQYHVSGNIDTDNPASLYSHLFNNALPVLEVGAQSQEHYMIALKELEELLDKFDILDNNSL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00017 669 Coils Coil 467 487 - -
Gabi2043g00017 669 Pfam MULE transposase domain 265 355 IPR018289 -
Gabi2043g00017 669 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Gabi2043g00017 669 MobiDBLite consensus disorder prediction 27 41 - -
Gabi2043g00017 669 MobiDBLite consensus disorder prediction 1 16 - -
Gabi2043g00017 669 SMART 26again6 562 589 IPR006564 GO:0008270
Gabi2043g00017 669 Pfam FAR1 DNA-binding domain 58 142 IPR004330 -
Gabi2043g00017 669 MobiDBLite consensus disorder prediction 1 41 - -
Gabi2043g00017 669 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 660 IPR031052 GO:0006355
Gabi2043g00017 669 Pfam SWIM zinc finger 554 584 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00017 Gabi-Chr2043 139129 144202 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi2043g00017 MULE 7.1e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00017 K17604 - gmx:100811666 1220.68