Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00010 ATGGAGGAAGGAAGAACATATTATATGAAACTTGAAGCCTATGTTCTGAATGAGTGGCTTAATGTTCTTCAGTCAGTCCAAATCCCCTTTGCACTTATTCCTTTGCTCTGTCTGATGTCAAAGGAGCAGATAATGGGCAGCTTCAAAATTGGCTCTGACCTCAAGGTATGGCGCCCTTTTATCTGCATTTTGGTCACACTGGTCACTTATCAGATACCCAATATTGGTTTATATATCTGGTATGTGAAAAGGAAGCATCTTATTGATGTTAGTGAAGTGTTTAGGGTACTTAATGCTGAGAAGAAATTTCGGATAGCATCTTATAATTGTCTTCAGCTGTTGAAAAGTATGGGTAAGGATAAGCAGAAAAGTATAGATGTGTTCTTTAAAAAGAAACTAGTCTCTGAAAGTGAATCAAGTGATGCTCTTACGAACATAATTTCTGAAAGTGATGCACCTTCTCATGAGCAACCTCCTTCCAAGTGTCGTAGAATTGAACATACTGATGACATTATTACAGTCAAAAATAAAAATTTTGAACGTGATACAGGCAAACGATGTTCTTTTAGAGGGCATGATGAGACTATTGATTCAAGAAATAGGGGTAATTTTATTGAAATGATCAAACTTTTGGCATCTTACAATGAAAAAGTTGCAGATGTCGTTCTAAAGAATGCTCCATTGACGGCCAAGTATACCTCACCTCAAATACAAAAGGAGATTTTATATGTTCTAGAAAACAAAGTGCGAAAGCAGATTCGCAAAGATATTGGGGATTCTAAGTTTTGTATTATTGTGGATGAAGCACGTGATGAATCTAAAAGGGAACAAATGGCTCTTAATATCTGTGGCCAAGGATATGATGGTGCTAGTAACATGTGTGGTGAATGGAATGGATTGCAAGCATTATTTGTTAATGAATGTCCTTGTGCGTATTATGTGCATTGTTTTGCTCATCGATTACAATTAGCCTGGATTGCTGCCTCTAAGGAATTTTCTTCTATTTATCAATTCTTTCAGAATTTGAATTTCATCATTAATATTATCACTGCATCTTCTAAACGTCATGATCAATTCCAAGCTGCCCAGATTTCAGAATTTGAACGTTTGCAGACTATTGGTGAGCTTGAAACTGGTACAGGTTCTAACCAAGTAGGTACACTAAAGCGGGCTAGTGATACTAGATGGGGTTCTCATTTTTATTCTATATGCAGTCTTCAACGAGGGTATAATGAATCATGTTCAGTACTTGAAAAAATTCGCCGCGAAGGCTCAAATTACTCTCAAAGAGAAGATGCTACTGCAGCGTATAAGATGATCACTTCGTTTGAGTTTATCTTTACTTTACTTTTGATGAAGGAGATCATGGGCATCACTGAAATTCTTTGTCAAGCATTGCAACAAAAATCTCAAGATATTTTGAATGCTATGCAATTAGTTTCAAGTACAAAGGAACTTATTCAAGAATTGCGAGATGATGGTTGGAAAAGAATACTTGAAAGTGTTGTTAATTTCTCTAAGCTTCATGAAATAGATGTTCCAGATCTTAATGCTCAATATATTGAAGGTCGTGGCCGTCGACAGCATGATCAAATAACTATTGAGCATCATTATCATTTTGATATCTTTAATTCAACCATTGACTTTCAATTACAAGAATTAAATATAAGGTTTACTGAGCAAACAACGGAACTTTTATCACTTAGCTCTTCATTAGATCCGAAGAATGGTTACAAAGCACTTAATGTTGATGATATTTGTAGCCTTGCAGAGAAATATTATCCTCTTGATTTTTCTGAGCAAGAGAGAATTAATTTGAATTGTCAATTGAAGCATTTTCACAAGGACATCCCAAAACATCCAGAACTTCAAAATTTATCTTCAATTTCTGAGTTGTGTCAAGGATTAGCTAAGACAGGAAAGTCAAATTCTTATCATTTGGTTGATAGGCTAATTCGTCTTATCTTAACGCTACCAGTTTCAACAGCAAATGGTGAACGTGCATTCTCAGCAATGAAAATTGTGAAAACAAGGCTTCGAAACAAAATGGATGATGAATTTCTTGCAAATAATTTGGTTGTGTATGTTGAAAGAGATATTGCTGAAACTTTTACTACAGATTCGATCCTTGAAGATTTCGTTAATTTAAAAGAGCGTCGCTTACAATTTTAG 2172 0.3522 MEEGRTYYMKLEAYVLNEWLNVLQSVQIPFALIPLLCLMSKEQIMGSFKIGSDLKVWRPFICILVTLVTYQIPNIGLYIWYVKRKHLIDVSEVFRVLNAEKKFRIASYNCLQLLKSMGKDKQKSIDVFFKKKLVSESESSDALTNIISESDAPSHEQPPSKCRRIEHTDDIITVKNKNFERDTGKRCSFRGHDETIDSRNRGNFIEMIKLLASYNEKVADVVLKNAPLTAKYTSPQIQKEILYVLENKVRKQIRKDIGDSKFCIIVDEARDESKREQMALNICGQGYDGASNMCGEWNGLQALFVNECPCAYYVHCFAHRLQLAWIAASKEFSSIYQFFQNLNFIINIITASSKRHDQFQAAQISEFERLQTIGELETGTGSNQVGTLKRASDTRWGSHFYSICSLQRGYNESCSVLEKIRREGSNYSQREDATAAYKMITSFEFIFTLLLMKEIMGITEILCQALQQKSQDILNAMQLVSSTKELIQELRDDGWKRILESVVNFSKLHEIDVPDLNAQYIEGRGRRQHDQITIEHHYHFDIFNSTIDFQLQELNIRFTEQTTELLSLSSSLDPKNGYKALNVDDICSLAEKYYPLDFSEQERINLNCQLKHFHKDIPKHPELQNLSSISELCQGLAKTGKSNSYHLVDRLIRLILTLPVSTANGERAFSAMKIVKTRLRNKMDDEFLANNLVVYVERDIAETFTTDSILEDFVNLKERRLQF 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00010 723 Pfam Domain of unknown function (DUF4371) 187 281 IPR025398 -
Gabi2043g00010 723 Pfam hAT family C-terminal dimerisation region 640 699 IPR008906 GO:0046983
Gabi2043g00010 723 Pfam Natural resistance-associated macrophage protein 15 51 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gabi2043g00010 723 PANTHER - 281 720 - -
Gabi2043g00010 723 SUPERFAMILY Ribonuclease H-like 251 693 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00010 Gabi-Chr2043 96233 100083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00010 15 68 Inorganic Solute Cotransporters AT2G23150 70.370 8.02e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00010 - - csav:115695488 752.666