Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2043g00001 ATGTCCACTGAGAAGGAGAGAGAGAATCAGGTTTACATGGCCAAGCTTGCTGAGCAGGCCGAGAGATATGAAGAAATGGTTGAATGCATGAAGACAGTAGCAAAACTTGATCTTGAGCTAACTGTGGAAGAGAGGAACCTCCTCTCCGTGGGATATAAAAACGTCATTGGTGCACGGCGAGCCTCTTGGCGCATTATGTCTTCAATTGAACAGAAGGAAGAGTCTAAAGGAAATGAGAACAATGTGAAACTGATCAAGAGTTACTGCCAAAAAGTCGAAGAGGAACTATCGAAAATTTGCAATGACATTCTGACAATTATTGACCAGCATCTGATTCCTTCTTCCACCTCATCAGGAGAAGCTACTGTTTTCTATTATAAGATGAAAGGTGACTATTTTCGATATCTTGCTGAGTTCAAGTCCGACCAAGAAAGGAAGGAAGCAGCTGAGCAGTCACTAAAAGGATATGAAGCTGCTTCAGCCGCTGCAAGCACAGATCTTCCATCAACACACCCAATCCGGCTTGGACTTGCACTCAACTTCTCTGTCTTTTATTATGAGATAATGAACTCCCCTGAAAGGGCTTGTCATTTGGCTAAACAAGCTTTCGATGAGGCAATAGCTGAGCTAGACACCTTAAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACCTCTGATTTGCCTGAGGATGGAGGTGAAGAAATCAAAACAGAAGAAACCAAACCTGCTGAACCTGAGGTATACAGAAAACAACGTGCAAACATTTCTGTTGACAATTTTTTTTCTTTTTATGTACAGCATTAA 840 0.4226 MSTEKERENQVYMAKLAEQAERYEEMVECMKTVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENNVKLIKSYCQKVEEELSKICNDILTIIDQHLIPSSTSSGEATVFYYKMKGDYFRYLAEFKSDQERKEAAEQSLKGYEAASAAASTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEEIKTEETKPAEPEVYRKQRANISVDNFFSFYVQH 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2043g00001 279 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Gabi2043g00001 279 Coils Coil 13 33 - -
Gabi2043g00001 279 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Gabi2043g00001 279 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Gabi2043g00001 279 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Gabi2043g00001 279 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Gabi2043g00001 279 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Gabi2043g00001 279 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Gabi2043g00001 279 PANTHER 14-3-3 PROTEIN 7 238 IPR000308 -
Gabi2043g00001 279 Pfam 14-3-3 protein 13 236 IPR023410 -
Gabi2043g00001 279 Gene3D - 1 248 IPR036815 -
Gabi2043g00001 279 SUPERFAMILY 14-3-3 protein 6 238 IPR036815 -
Gabi2043g00001 279 SMART 1433_4 7 249 IPR023410 -
Gabi2043g00001 279 Coils Coil 139 159 - -
Gabi2043g00001 279 Coils Coil 196 216 - -
Gabi2043g00001 279 PIRSF 14-3-3 1 248 IPR000308 -
Gabi2043g00001 279 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Gabi2043g00001 279 FunFam 14-3-3 protein epsilon 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2043g00001 Gabi-Chr2043 8313 11381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2043g00001 2 253 14-3-3 family AT1G26480 86.957 6.11e-162 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2043g00001 K06630 - qsa:O6P43_025542 472.241