Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2040g00014 ATGGCTGCCGCCGGCGAAGTTTTCAGGCAGAATTTTACTGAGATGTTCGAGGAGTCACCTTCCGGTGCAGACGAGCTGCACGTTCTTGCTGTTGATGACAGCCTCGTCGATCGCAAGTTAATTGAACGCTTGCTCAAGATTTCTTCTTGCAAAGTGACGGTTGTAGAGAGTGGAACACGAGCTCTTCAGTATTTGGGATTGGACGGAGAGAAGGGTTCTCTAGGGCTTGATGGTGTGAAGGTTAATCTGATAATGACGGATTATTCCATGCCGGGGATGACTGGATATGAACTACTCAAGAAAATCAAGGAGTCTTCTGTTTTTAGAGAGATTCCAGTGGTGGTCATGTCGTCGGAGAATATCTTGACTCGAATTGATAAGTGCCTGGAGGAAGGAGCAGAGGAGTTTCTGTTGAAGCCCGTCAAGTTGTCAGATGTAACACGCCTAAAAGATTTCATCATGAGAGGTGAAATGAAAGAAAGCGAGAAAGGATCTCCCAAAAGAAGACGATCAGATGATGATTGCAGTCCATCTTTATCAACTATGTTCTCACCAATGTCTCATCCATGCGATCCATCATCAGTAATTTCACCATTATCACCATCCACATTATTATCCTCAAAGAAGTCTAGATTGTGA 639 0.4429 MAAAGEVFRQNFTEMFEESPSGADELHVLAVDDSLVDRKLIERLLKISSCKVTVVESGTRALQYLGLDGEKGSLGLDGVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVVMSSENILTRIDKCLEEGAEEFLLKPVKLSDVTRLKDFIMRGEMKESEKGSPKRRRSDDDCSPSLSTMFSPMSHPCDPSSVISPLSPSTLLSSKKSRL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2040g00014 212 MobiDBLite consensus disorder prediction 176 212 - -
Gabi2040g00014 212 Gene3D - 26 181 - -
Gabi2040g00014 212 MobiDBLite consensus disorder prediction 157 175 - -
Gabi2040g00014 212 MobiDBLite consensus disorder prediction 157 212 - -
Gabi2040g00014 212 CDD REC_typeA_ARR 28 149 - -
Gabi2040g00014 212 SUPERFAMILY CheY-like 25 151 IPR011006 -
Gabi2040g00014 212 SMART REC_2 26 150 IPR001789 GO:0000160
Gabi2040g00014 212 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Gabi2040g00014 212 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 169 IPR045279 GO:0009736
Gabi2040g00014 212 Pfam Response regulator receiver domain 28 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2040g00014 Gabi-Chr2040 152763 155201 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2040g00014 3 170 Response Regulator Gene Family AT1G19050 67.241 1.80e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2040g00014 Response_reg 2.9e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2040g00014 K14492 - gmx:100796843 300.056