Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2032g00019 ATGATGGCCGAGACCAGAAAATACATTCCGAACGTTCAACAATTAGGATTAGAGCTTGAAGAGATACTACGAGAAGCCAAGCATCGTTGGCTTCGTCCTGCTGAAATATGCGAAATACTTCGCAATTATCGCAAGTTTGAGTTAACATCAGTTCCACCGATTACGCCTCCAGCTGGATCACTATTCTTGTTTGATCGAAAAGCTCTTCGTTACTTTCGCAAGGATGGTCACCGGTGGAGAAAAAAGAAAGACGGGAGGACTGTAAGAGAAGCTCATGAAAAGTTGAAGGCTGGTAGTGTGGATGTCTTGCATTGTTATTATGCTCATGGGGAGGATGATGACAACTTTCAACGGAGATGTTATTGGATGCTTGATGAGCAGTTAGAGCACATTGTCCTTGTGCATTATCGAGAAATTAAAGAGGGATGCAGGTCTGGCATCTCACATTTTCCTGTAGTCCCAGTTACCCAGGTTGGTGGCTCTCAAAGTAGTTCAGCGCCTTCCTCTGGCAAAATAAACTCCCCATTATCCGTAGCTCAAACATCTTTTACATCAAGTGAAAATAAAGTTGATCAGAATGGACGAGCTTCAGAGTATAAGGATGCTGACTCACAGAAAGGTCTTCAAGCCTCTTCTCATGCCCAACCTATCAGCAATTCCATACTTTGTGGTGCACCTCGGCTTGCACATGAAACCACCGGTGGGTTTTCTCAGTTACCAAGAAATCCCTTTATTTCGTGGTCATCTTCTCTCCCTAGCTTTTCTTCTGATACTGGCTTGTCCCCGTGGGCTCTGGTTCAGAACTCTGGCAGAAACACGGTTTACATGCATGATAGAGAACTGCATGTTGAAGGATCCACTGAAGGCCCTGAAGCTGACTTCACTGTTCATAAGCTAAGCGATGCAGTTCACAAAATGCAAGATGGTATAATTTTCAGAGATAGGCTTAGTACTGGCAAGTATATCCAGCCAGTTACAGGAGCTTTACAGACTGTAAATCAGGTGCAAAAGGAGCATGATTTAGATTCATTTCATACCCTATTCCATGGTCATACTGATCTAACAGTTGCTGCAACTACTACAGTCCTTGTTGAACAAAAATTTCAAGATGGTGGTACACACAATGATGAGTCAGAACATGTTGAATCTGGTGAATTGAAAAAGCTTGATAGTTTTGGAAGGTGGATGGATAAGGAGATTGGTGGTGACTGTGATAATTCCTTGATGGCTTCAGACTCTGGCAATTATTGGAGCACACTTGATGCTCATAATGAGGATAAGGAGGTGTCTAGTTTATGCCACATGCAGTTGGATATGGATTCATTAGGCCCTTCTCTTTCTCAAGAACAACTATTTAGTATCCATGACTTCTCTCCAGAATGGGCATACGCTGGGGATAGAACAAAGGTTTTAATAGTTGGTACATTTCTGGGGAGTAAAACGCTTTCTAGTGAGACCAAATGGGGATGTATGTTTGGTGAAATTGAGGTTTCTGCTGAAGTTTTGGCAGAGAATGTCATACGGTGCCAGACTCCTTTGCATTCACCTGGTCGTGTTCCATTCTATGTTACCTGCAGCAATAGGTTAGCCTGTAGCGAGATCAGAGAATTTGAATATCATGAAAATCCAACTAAATTTTTTGCTCCTGTGGGTATTAAAATCTCACCAGAAGATGAGGTACGGCTTCAAATGCGACTACTTAAACTAGTAGACTTGGGACCTGACAAGAAGTGGTTGAAGTGCTCTGTTTCTGAATGCGAAAAATGTAAACTTAAGGAAACAATGTATTCCATGAGAGGTGATAATGGAGTATTAAAAGAAACTTTCCAGATTGATGGAAGTGATCACATAAACCCTAGAGATGTGTTATTTCAGAAATTAATGAGAGACAGGCTTTATGAGTGGTTGATATTTAAGGTTCATGAAGGAGGAAAAGGACCACAAGTGTTGGACAATGAAGGCCAAGGAGTAATACATTTGGCTGCTGCCCTTGGTTATGTGTGGGCTATGGGCCCATTAATTGCTGTTGGTATCAGTCCTAACTTTAGAGATGCTCATGGAAGAACAGGACTTCACTGGGCGTCATATTTTGGAAGAGAAGAAACTGTGATTGCCCTAGTCAAATTAGGAGCAGCCCCAGGTGCCGTTGAGGATCCAACATCATCATTTCCTCGAGGACAAACAGCAGCAGATTTAGCTTCAAGTAGAGGACATAAAGGCATTGCTGGGTATTTGGCTGAGGCAGATCTGACTAGTCAATTATCTACATTGAGTGTCAATGAAAATGAGATGGACAACAGTGCCACAAACCTATCAGCTGACCATGCTTTTGAGTCTTCTGAAGGGTACTCATCTAATATGACAATGGATGAGCAACATTATCTAAAAGAGTCACTTGCTGCTTTTCAGAAATCAGCTCATGCAGCTGCTTCAATCCAAGCAGCCTTTAGAGCAAGATCATTCTGTCAGAGACAATTAGCCAAAAGTAGCAGTGATATTTCTGAAGTAGTACATGACCTAGTTGGTGAATCTTTGAACAAGGTTCAGAAGATGGGTCACTTTGAGGATTATTTACATTTTGCAGCTTTAAAGATTCAAAAGAAATATCGTGGGTGGAAGGGAAGAAACAATTTTTTGAAAATACGCAACCGCATCATAAAAATTCAGGCTCATATTAGAGGACACCAAGTTCGTAAGCTGTACAAAAAAGTTGTTTGGTCTGTTAGCATTGTGGAAAAGGCAATACTGCGTTGGAGGCGGAAAAGAGCTGGTCTGCGAGGATTCCGAGTTGGGCCATCAGTTGGCATTGTTGCCAAAGATGATGACAAAAATGATGAGTATGAATTTCTTAGCATTGGGCGGAGACAGAAATCTGATGATGTAAAGAAAGCTCTGGATAGAGTGAAGTCCATGGTTCGTCACCCAGAGGCACGAGATCAGTATATGAGGCTCATCATGAAATATCAGACTTATAAGATTGATGATGGTGGAAACAGTCAATCACAGCCTGTTGATTAG 3018 0.4188 MMAETRKYIPNVQQLGLELEEILREAKHRWLRPAEICEILRNYRKFELTSVPPITPPAGSLFLFDRKALRYFRKDGHRWRKKKDGRTVREAHEKLKAGSVDVLHCYYAHGEDDDNFQRRCYWMLDEQLEHIVLVHYREIKEGCRSGISHFPVVPVTQVGGSQSSSAPSSGKINSPLSVAQTSFTSSENKVDQNGRASEYKDADSQKGLQASSHAQPISNSILCGAPRLAHETTGGFSQLPRNPFISWSSSLPSFSSDTGLSPWALVQNSGRNTVYMHDRELHVEGSTEGPEADFTVHKLSDAVHKMQDGIIFRDRLSTGKYIQPVTGALQTVNQVQKEHDLDSFHTLFHGHTDLTVAATTTVLVEQKFQDGGTHNDESEHVESGELKKLDSFGRWMDKEIGGDCDNSLMASDSGNYWSTLDAHNEDKEVSSLCHMQLDMDSLGPSLSQEQLFSIHDFSPEWAYAGDRTKVLIVGTFLGSKTLSSETKWGCMFGEIEVSAEVLAENVIRCQTPLHSPGRVPFYVTCSNRLACSEIREFEYHENPTKFFAPVGIKISPEDEVRLQMRLLKLVDLGPDKKWLKCSVSECEKCKLKETMYSMRGDNGVLKETFQIDGSDHINPRDVLFQKLMRDRLYEWLIFKVHEGGKGPQVLDNEGQGVIHLAAALGYVWAMGPLIAVGISPNFRDAHGRTGLHWASYFGREETVIALVKLGAAPGAVEDPTSSFPRGQTAADLASSRGHKGIAGYLAEADLTSQLSTLSVNENEMDNSATNLSADHAFESSEGYSSNMTMDEQHYLKESLAAFQKSAHAAASIQAAFRARSFCQRQLAKSSSDISEVVHDLVGESLNKVQKMGHFEDYLHFAALKIQKKYRGWKGRNNFLKIRNRIIKIQAHIRGHQVRKLYKKVVWSVSIVEKAILRWRRKRAGLRGFRVGPSVGIVAKDDDKNDEYEFLSIGRRQKSDDVKKALDRVKSMVRHPEARDQYMRLIMKYQTYKIDDGGNSQSQPVD 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2032g00019 1005 ProSiteProfiles Ankyrin repeat region circular profile. 686 711 - -
Gabi2032g00019 1005 Gene3D - 629 751 IPR036770 -
Gabi2032g00019 1005 SMART CG_1_2 22 140 IPR005559 GO:0003677
Gabi2032g00019 1005 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 19 989 - -
Gabi2032g00019 1005 MobiDBLite consensus disorder prediction 182 213 - -
Gabi2032g00019 1005 FunFam Calmodulin-binding transcription activator 2 857 905 - -
Gabi2032g00019 1005 Pfam IPT/TIG domain 454 539 IPR002909 -
Gabi2032g00019 1005 Gene3D - 856 905 - -
Gabi2032g00019 1005 Pfam IQ calmodulin-binding motif 883 902 IPR000048 GO:0005515
Gabi2032g00019 1005 Pfam IQ calmodulin-binding motif 861 878 IPR000048 GO:0005515
Gabi2032g00019 1005 SMART ANK_2a 725 754 IPR002110 GO:0005515
Gabi2032g00019 1005 SMART ANK_2a 686 715 IPR002110 GO:0005515
Gabi2032g00019 1005 Pfam CG-1 domain 25 138 IPR005559 GO:0003677
Gabi2032g00019 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 853 908 IPR027417 -
Gabi2032g00019 1005 SUPERFAMILY E set domains 454 539 IPR014756 -
Gabi2032g00019 1005 FunFam Calmodulin-binding transcription activator 2 447 544 - -
Gabi2032g00019 1005 SMART iq_5 880 902 IPR000048 GO:0005515
Gabi2032g00019 1005 SMART iq_5 804 828 IPR000048 GO:0005515
Gabi2032g00019 1005 SMART iq_5 857 879 IPR000048 GO:0005515
Gabi2032g00019 1005 CDD IPT 453 541 - -
Gabi2032g00019 1005 ProSiteProfiles IQ motif profile. 858 887 IPR000048 GO:0005515
Gabi2032g00019 1005 Gene3D Immunoglobulins 447 545 IPR013783 -
Gabi2032g00019 1005 SUPERFAMILY Ankyrin repeat 641 748 IPR036770 -
Gabi2032g00019 1005 ProSiteProfiles CG-1 DNA-binding domain profile. 19 145 IPR005559 GO:0003677
Gabi2032g00019 1005 ProSiteProfiles Ankyrin repeat profile. 686 718 IPR002110 GO:0005515
Gabi2032g00019 1005 ProSiteProfiles IQ motif profile. 881 909 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2032g00019 Gabi-Chr2032 264314 273330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2032g00019 63 985 CAMTA Transcription Factor Family AT2G22300 38.413 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Gabi2032g00019 CG-1 8.4e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2032g00019 K21596 - gmx:100818336 1582