Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2032g00008 ATGATCGTGAGCCAGAAGATGGTAGCGGAAGCGGAAATTATATGTCAGCAGAGCATTCCCATGTTGGACGTGAAGTATCACCTTTGCGTGGAACAAGAACACAACGTCAAGGTTGAGGTTTCACCCACCTCACCCTCTCCTTCTTTCCCGATCTTTGGCCAAGCTGCGAGTTGCTCTGAGATCATTAAAGATTCCCTTTTGGAGACCCCTGCAATTAAGTTTATCCCGAATGTGCGTTCTGGTAGCTATGCTGCAATTGGACCGCGAGAATCTATGGATGATGAACACATTCGTATAGATGATTTAGCTGCCAACCTTGGTTTTGTGTTCAAATACCCAATGCCAAGTGCATTTTATGCCGTTTTTGATGGGCATGGGGGACCTGATGCAGCCTCTTTTGTTAAGAGGAATGCTATGAGATTATTTTTTGAAGATGCTGACTTGCTGCAATCATATGATACTGATGCATTTTTTCTAAAGAAATTGGAGGAGTCTCATCGGAGAGCTTTTTTACGGGCAGACCTTGCCTTGGCTGATGAACAAGATATTAGTAGTTCATGTGGCACTACAGCATTGACTGCTCTTGTACTCGGAAGGCATTTGCTGGTTGCCAATGCTGGTGACTGTCGAGCAGTCCTTTGCAGGAGAGGTACAGCTGTTAATATGTCTCAAGATCACAGGCCAAGTTATTTACCAGAACGCAAGAGAGTGGAGGAGTTAGGTGGCTTCATTGATGATGAATATCTCAATGGTTATCTTTCAGTAACTCGTGCCCTTGGGGATTGGGACATGAAATTTCCACTTGGTGCTGCATCACCCCTTATTGCTGAGCCAGATGTTCAACTGATTACATTGACAGAGGATGATGAGTTCTTAATCATTGGGTGTGATGGGATTTGGGATGTAATGTCTAGCCAAGTAGCAGTTAGCCTTGTTCGGCGTGGATTAAGAAGGCATGATGACCCACAGCAATGTGCCAGAGAACTAGTCAAGGAAGCCTTGCGCCTGAATACATCGGATAACCTTACTGCGATTGTCATATGCTTGTCCCCCATTGAAAACATTGTTGATTCATGTCCGCCCCAAAGGCGAAGATTCAAAGCCTGCAGTCTGTCTGAAGAGGCCCGTAATAGATTGAAGAGCTTGATAGAGGGAAATTGA 1161 0.4496 MIVSQKMVAEAEIICQQSIPMLDVKYHLCVEQEHNVKVEVSPTSPSPSFPIFGQAASCSEIIKDSLLETPAIKFIPNVRSGSYAAIGPRESMDDEHIRIDDLAANLGFVFKYPMPSAFYAVFDGHGGPDAASFVKRNAMRLFFEDADLLQSYDTDAFFLKKLEESHRRAFLRADLALADEQDISSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGTAVNMSQDHRPSYLPERKRVEELGGFIDDEYLNGYLSVTRALGDWDMKFPLGAASPLIAEPDVQLITLTEDDEFLIIGCDGIWDVMSSQVAVSLVRRGLRRHDDPQQCARELVKEALRLNTSDNLTAIVICLSPIENIVDSCPPQRRRFKACSLSEEARNRLKSLIEGN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2032g00008 386 ProSiteProfiles PPM-type phosphatase domain profile. 79 349 IPR001932 -
Gabi2032g00008 386 Gene3D - 71 353 IPR036457 -
Gabi2032g00008 386 SMART PP2C_4 69 347 IPR001932 -
Gabi2032g00008 386 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Gabi2032g00008 386 CDD PP2Cc 78 349 IPR001932 -
Gabi2032g00008 386 PANTHER PROTEIN PHOSPHATASE 2C 71 347 IPR015655 GO:0004722|GO:0006470
Gabi2032g00008 386 SUPERFAMILY PP2C-like 73 351 IPR036457 -
Gabi2032g00008 386 FunFam Probable protein phosphatase 2C 22 63 352 - -
Gabi2032g00008 386 SMART PP2C_SIG_2 94 349 IPR001932 -
Gabi2032g00008 386 Pfam Protein phosphatase 2C 87 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2032g00008 Gabi-Chr2032 77571 79960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2032g00008 1 385 PP2C-type Phosphatase Gene Family AT1G48040 56.359 3.31e-148 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2032g00008 K14803 - gmx:100781949 671.774