Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2030g00001 ATGCTTTTATATATGGCTGCCTTGGAGGTTACCAAGAGTAATGTGGGGACTTCTACGGTTAGGTTTGGTATTGGAGAACCTACAGCTGCGGCAATTGCCAATGCAGTTGCTGGCTTGAGTGCAGCCATGGCAGCTCAACTTGTGTGGACCCCAATTGATGTTGTGAGCCAGAGGTTGATGGTTCAAGATGGTTATAATTCCAGTAATCCTAAGGCTTCAGCTTGTCGATATGTCAATGGGATTGATGCCTTCCGGAAAATTCTTAGCACAGATGGCCCTAGGGGCTTGTATAGAGGTTTTGGGATATCAATCTTGACCCATGCACCTTCCAATGCAGTTTGGTGGGCTTCATATTCTCTTGCACAAAGGATGGTTTGGGGTGGAGTTGGGTACTACTTGTGCAAGAAAAGTGAGGAGAGGAGTGACACTGCAACTAATGTTAATGCTAGTGCTAGTGCTAATGCTTTGAGGCCAGATACAAAAACAGTAATGGCAGTTCAGGGACTCAGTGCAGCAATGGCTGGTGGCATGTCTGCTTTGATTACCATGCCACTGGATACAATCAAGACAAGACTGCAAGTCTTGGATGGTGATGAGAATGGCCGTCGCGGACCAACAGTTATGCAGACGGTGAGGAGTCTGGTTAAGGAAGGTGGCTGGATGGCTTGTTACAGAGGATTGGGACCTCGATGGGCTTCAATGTCAATGTCTGCAACGACAATGATCACAACCTATGAGTTCCTAAAAAGGCTTTCCGCAAAGAATCAAGAGGTTTTGACATGA 783 0.4662 MLLYMAALEVTKSNVGTSTVRFGIGEPTAAAIANAVAGLSAAMAAQLVWTPIDVVSQRLMVQDGYNSSNPKASACRYVNGIDAFRKILSTDGPRGLYRGFGISILTHAPSNAVWWASYSLAQRMVWGGVGYYLCKKSEERSDTATNVNASASANALRPDTKTVMAVQGLSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWMACYRGLGPRWASMSMSATTMITTYEFLKRLSAKNQEVLT 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2030g00001 260 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 2 257 - -
Gabi2030g00001 260 ProSiteProfiles Solute carrier (Solcar) repeat profile. 162 251 IPR018108 -
Gabi2030g00001 260 Gene3D Mitochondrial carrier domain 1 259 IPR023395 -
Gabi2030g00001 260 Pfam Mitochondrial carrier protein 31 125 IPR018108 -
Gabi2030g00001 260 Pfam Mitochondrial carrier protein 165 255 IPR018108 -
Gabi2030g00001 260 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 124 IPR018108 -
Gabi2030g00001 260 SUPERFAMILY Mitochondrial carrier 30 248 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2030g00001 Gabi-Chr2030 525 1499 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2030g00001 3 257 Chloroplast and Mitochondria Gene Families AT1G72820 72.093 6.52e-127 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2030g00001 K15121 - gmx:100784616 411.379